RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 GGT2P36268 569 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 ACAA2P42765 397 aaKnown RBP17.45■□□□□ 0.38
SMC4-209ENST00000468653 CRISP1P54107 249 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 NUP107P57740 925 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 SLC26A5P58743 744 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 COX10Q12887 443 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 NDUFAF6Q330K2 333 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 RBM48Q5RL73 367 aaKnown RBP17.45■□□□□ 0.38
SMC4-209ENST00000468653 C6orf141Q5SZD1 244 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 HES3Q5TGS1 186 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 ZNF613Q6PF04 617 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 ZNF440Q8IYI8 595 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 GATSQ8NAP1 163 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 TMEM255BQ8WV15 326 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 HDAC2Q92769 488 aaKnown RBP17.45■□□□□ 0.38
SMC4-209ENST00000468653 POLR1BQ9H9Y6 1135 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 REV1Q9UBZ9 1251 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 PCDHGA6Q9Y5G7 932 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 OTOGLQ3ZCN5 2332 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 GTPBP1O00178 669 aaKnown RBP17.44■□□□□ 0.38
SMC4-209ENST00000468653 ICOSLGO75144 302 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 KLF7O75840 302 aaPredicted RBP17.44■□□□□ 0.38
SMC4-209ENST00000468653 NTN1O95631 604 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 UMODP07911 640 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 CD63P08962 238 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 GSTM3P21266 225 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 CHMP24386 653 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 FOLR3P41439 243 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 CDK5R2Q13319 367 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 EIF3IQ13347 325 aaKnown RBP17.44■□□□□ 0.38
SMC4-209ENST00000468653 PTGES3Q15185 160 aaKnown RBP17.44■□□□□ 0.38
SMC4-209ENST00000468653 CD300LDQ6UXZ3 194 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 PRICKLE2Q7Z3G6 844 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 OR5L2Q8NGL0 311 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 OR2Y1Q8NGV0 311 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 NUBPLQ8TB37 319 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 CNIH3Q8TBE1 160 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 PHOSPHO1Q8TCT1 267 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 GRHL3Q8TE85 626 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 THAP3Q8WTV1 239 aaPredicted RBP17.44■□□□□ 0.38
SMC4-209ENST00000468653 KRCC1Q9NPI7 259 aaPredicted RBP17.44■□□□□ 0.38
SMC4-209ENST00000468653 RPS6KB2Q9UBS0 482 aa17.44■□□□□ 0.38
SMC4-209ENST00000468653 LOC102723996A0A087X1L8 192 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 DPPA5A6NC42 116 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 H3BN98 237 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 FOXD2O60548 495 aaPredicted RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 SOX14O95416 240 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 UBL4AP11441 157 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 CDK4P11802 303 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 ADH7P40394 386 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 IDH2P48735 452 aaKnown RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 PNLIPRP2P54317 469 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 CDH15P55291 814 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 TOP3AQ13472 1001 aaPredicted RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 TMEM164Q5U3C3 297 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 MBOAT2Q6ZWT7 520 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 GLRX5Q86SX6 157 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 NLGN4XQ8N0W4 816 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 FAM81AQ8TBF8 368 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 FBLIM1Q8WUP2 373 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 IRF2BPLQ9H1B7 796 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 A0A1B0GWA3 101 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 ADAM11O75078 769 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 ZFAND5O76080 213 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 ALDH6A1Q02252 535 aaKnown RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 APOFQ13790 326 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 MAD2L1BPQ15013 274 aaPredicted RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 CD226Q15762 336 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 DESI1Q6ICB0 168 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 MEX3DQ86XN8 651 aaKnown RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 CCDC71Q8IV32 467 aaPredicted RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 NRMQ8IXM6 262 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 DEPDC4Q8N2C3 294 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 CADM2Q8N3J6 435 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 DEFB124Q8NES8 71 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 OR8K3Q8NH51 312 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 FAM46AQ96IP4 442 aaKnown RBP17.43■□□□□ 0.38
SMC4-209ENST00000468653 PRSS27Q9BQR3 290 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 RASSF1Q9NS23 344 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 SELENONQ9NZV5 590 aa17.43■□□□□ 0.38
SMC4-209ENST00000468653 A0A087WXM4 84 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 A6NHS1 94 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 ZAR1LA6NP61 321 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 LYPD3O95274 346 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 EEF1B2P24534 225 aaKnown RBP17.42■□□□□ 0.38
SMC4-209ENST00000468653 NBL1P41271 181 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 COPZ1P61923 177 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 C3orf38Q5JPI3 329 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 FNDC7Q5VTL7 733 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 TMEM236Q5W0B7 351 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 APOOLQ6UXV4 268 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 C16orf47Q6ZP98 133 aaPredicted RBP17.42■□□□□ 0.38
SMC4-209ENST00000468653 LSMEM1Q8N8F7 131 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 WDR36Q8NI36 951 aaKnown RBP17.42■□□□□ 0.38
SMC4-209ENST00000468653 TMEM239Q8WW34 195 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 UBE2FQ969M7 185 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 GPA33Q99795 319 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 ZBTB20Q9HC78 741 aaPredicted RBP17.42■□□□□ 0.38
SMC4-209ENST00000468653 IMPAD1Q9NX62 359 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 CNIH4Q9P003 139 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms