RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 BCKDHAP12694 445 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 COX7A1P24310 79 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 HOXA9P31269 272 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 CTNNB1P35222 781 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 SH3BGRP55822 239 aaPredicted RBP1.42□□□□□ -2.18
SSB-208ENST00000468600 HERVK_113P63132 956 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 ERVK-8P63133 956 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 MEF2BQ02080 365 aaPredicted RBP1.42□□□□□ -2.18
SSB-208ENST00000468600 NME3Q13232 169 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 CCDC57Q2TAC2 916 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 PRR9Q5T870 116 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 C11orf88Q6PI97 169 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 CLEC4GQ6UXB4 293 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 UNC5DQ6UXZ4 953 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 PAQR9Q6ZVX9 377 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 TTC5Q8N0Z6 440 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 NEK11Q8NG66 645 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 RNASE8Q8TDE3 154 aaKnown RBP1.42□□□□□ -2.18
SSB-208ENST00000468600 FRZBQ92765 325 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 LINC00477Q96M19 166 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 CDX2Q99626 313 aaPredicted RBP1.42□□□□□ -2.18
SSB-208ENST00000468600 RASL11BQ9BPW5 248 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 OSBPL11Q9BXB4 747 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 ERVK-6Q9BXR3 956 aa1.42□□□□□ -2.18
SSB-208ENST00000468600 MRPL9Q9BYD2 267 aaKnown RBP1.42□□□□□ -2.18
SSB-208ENST00000468600 MTRF1LQ9UGC7 380 aaKnown RBP1.42□□□□□ -2.18
SSB-208ENST00000468600 A0A0G2JLM5 398 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 GFYI3L273 518 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 N4BP1O75113 896 aaKnown RBP1.41□□□□□ -2.18
SSB-208ENST00000468600 ATP6V1G1O75348 118 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 SLC6A8P48029 635 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 PITPNBP48739 271 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 PRPS1P60891 318 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 CSNK1G2P78368 415 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 YWHAHQ04917 246 aaPredicted RBP1.41□□□□□ -2.18
SSB-208ENST00000468600 SRYQ05066 204 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 ARFRP1Q13795 201 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 C6orf120Q7Z4R8 191 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 VRK2Q86Y07 508 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 GCNT2Q8N0V5 402 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 OR8H3Q8N146 312 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 WDR36Q8NI36 951 aaKnown RBP1.41□□□□□ -2.18
SSB-208ENST00000468600 ADIPOR1Q96A54 375 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 ERP27Q96DN0 273 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 CEP170P1Q96L14 293 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 GPR61Q9BZJ8 451 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 POLR2J2Q9GZM3 115 aaKnown RBP1.41□□□□□ -2.18
SSB-208ENST00000468600 POLR2J3Q9H1A7 115 aaKnown RBP1.41□□□□□ -2.18
SSB-208ENST00000468600 PPDPFQ9H3Y8 114 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 SLC25A22Q9H936 323 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 STX8Q9UNK0 236 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 EIF3LQ9Y262 564 aaKnown RBP1.41□□□□□ -2.18
SSB-208ENST00000468600 UGT2A1Q9Y4X1 527 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
SSB-208ENST00000468600 MAP3K15Q6ZN16 1313 aa1.4□□□□□ -2.18
SSB-208ENST00000468600 C5orf51A6NDU8 294 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 LAD1O00515 517 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 AKAP3O75969 853 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 PLEKP08567 350 aaPredicted RBP1.4□□□□□ -2.19
SSB-208ENST00000468600 ZNF18P17022 549 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 HNF1AP20823 631 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 MARCKSP29966 332 aaPredicted RBP1.4□□□□□ -2.19
SSB-208ENST00000468600 NMT1P30419 496 aaKnown RBP1.4□□□□□ -2.19
SSB-208ENST00000468600 SSTP61278 116 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 TSTA3Q13630 321 aaPredicted RBP1.4□□□□□ -2.19
SSB-208ENST00000468600 PIGGQ5H8A4 983 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 P4HA3Q7Z4N8 544 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 CALHM3Q86XJ0 350 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 UNC45BQ8IWX7 931 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 TRUB1Q8WWH5 349 aaKnown RBP1.4□□□□□ -2.19
SSB-208ENST00000468600 SLC5A11Q8WWX8 675 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 TMEM158Q8WZ71 300 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 SPATA17Q96L03 361 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 MCHR1Q99705 422 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 FEM1AQ9BSK4 669 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 COPS7BQ9H9Q2 264 aaPredicted RBP1.4□□□□□ -2.19
SSB-208ENST00000468600 COPS7AQ9UBW8 275 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 FBXW2Q9UKT8 454 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 SNX5Q9Y5X3 404 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 LRP4O75096 1905 aa1.4□□□□□ -2.19
SSB-208ENST00000468600 TTC26A0AVF1 554 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 C11orf94C9JXX5 98 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 ALOX15BO15296 676 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 CISD3P0C7P0 127 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 PNMTP11086 282 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 AREGP15514 252 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 UQCRC2P22695 453 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 CRISP3P54108 245 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 WASHC5Q12768 1159 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 TMEM255AQ5JRV8 349 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 C12orf56Q8IXR9 622 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 ARFGAP2Q8N6H7 521 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 CYB561D1Q8N8Q1 229 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 NKAPP1Q8N9T2 125 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 SELENOMQ8WWX9 145 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 RPUSD4Q96CM3 377 aaKnown RBP1.39□□□□□ -2.19
SSB-208ENST00000468600 ZCCHC17Q9NP64 241 aaKnown RBP1.39□□□□□ -2.19
SSB-208ENST00000468600 AIG1Q9NVV5 245 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 PLA2G4CQ9UP65 541 aa1.39□□□□□ -2.19
SSB-208ENST00000468600 GNPDA1P46926 289 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms