RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 F8A1P23610 371 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GABRA3P34903 492 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 STT3AP46977 705 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GSK3BP49841 420 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 EFNA3P52797 238 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SUMO3P55854 103 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 LOXL3P58215 753 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF155Q12901 538 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 BIKQ13323 160 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GAB1Q13480 694 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 DNASE1L3Q13609 305 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 CEACAM7Q14002 265 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SERTAD2Q14140 314 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 LASP1Q14847 261 aaKnown RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 NCF4Q15080 339 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 RGNQ15493 299 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 TGIF1Q15583 401 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 CYP51A1Q16850 503 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 PRICKLE4Q2TBC4 344 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 CD300EQ496F6 205 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GPAT3Q53EU6 434 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF628Q5EBL2 1059 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 COQ5Q5HYK3 327 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SAMD4BQ5PRF9 694 aaKnown RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 LRIF1Q5T3J3 769 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GCNT6Q5T4J0 391 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ABHD17BQ5VST6 288 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 IGFL4Q6B9Z1 124 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GLYATQ6IB77 296 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 FAM198BQ6UWH4 519 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 HACD2Q6Y1H2 254 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 QSOX2Q6ZRP7 698 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ASRGL1Q7L266 308 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 OLIG3Q7RTU3 272 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 CPEB2Q7Z5Q1 589 aaKnown RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ANKRD37Q7Z713 158 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GALNT10Q86SR1 603 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 VASH2Q86V25 355 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ULK2Q8IYT8 1036 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ST13P4Q8IZP2 240 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 FBXW8Q8N3Y1 598 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 HORMAD2Q8N7B1 307 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 OR5D16Q8NGK9 328 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GOT1L1Q8NHS2 421 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ADAMTS15Q8TE58 950 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ZFP90Q8TF47 636 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 PTPMT1Q8WUK0 201 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 ASB10Q8WXI3 467 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 FIG4Q92562 907 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 PIK3R3Q92569 461 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 MAL2Q969L2 176 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 NCLNQ969V3 563 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 FAM162AQ96A26 154 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SENP5Q96HI0 755 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 LRFN5Q96NI6 719 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 KCTD14Q9BQ13 255 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 GPATCH1Q9BRR8 931 aaKnown RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 NUDT9Q9BW91 350 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 TRIM4Q9C037 500 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 C1orf21Q9H246 121 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 LRMDAQ9H2I8 198 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 OR51I1Q9H343 314 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 RAD21L1Q9H4I0 556 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SERHL2Q9H4I8 314 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 IKZF5Q9H5V7 419 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SPAG4Q9NPE6 437 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SIRT3Q9NTG7 399 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 SACM1LQ9NTJ5 587 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 C14orf105Q9NVL8 296 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 TBCCD1Q9NVR7 557 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 MAT2BQ9NZL9 334 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 TMEM181Q9P2C4 612 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 C19orf25Q9UFG5 118 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 KLK13Q9UKR3 277 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 KCNE3Q9Y6H6 103 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 V9GYQ6 96 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 PCNX2A6NKB5 2137 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 KIF26BQ2KJY2 2108 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 MYO15AQ9UKN7 3530 aa3.77□□□□□ -1.81
TMEM39A-204ENST00000468545 MUC6Q6W4X9 2439 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 IGLV3-12A0A075B6K2 115 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 C15orf38-AP3S2A0A0A6YYH1 394 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 TRBV11-1A0A0K0K1C0 115 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 GXYLT2A0PJZ3 443 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ELOVL7A1L3X0 281 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 MBD3L4A6NDZ8 208 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 MBD3L3A6NE82 208 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 TMEM247A6NEH6 219 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PRORSD1PA6NEY8 169 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CFAP73A6NFT4 308 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 FXYD1O00168 92 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PLOD2O00469 737 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CXCR6O00574 342 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 TRIAP1O43715 76 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 FZD7O75084 574 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 KLF7O75840 302 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 BCAS2O75934 225 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ONECUT2O95948 504 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 IGHEP01854 428 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ATP1B1P05026 303 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms