RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 C1orf123Q9NWV4 160 aa2.66□□□□□ -1.98
RBM39-226ENST00000468086 MTRRQ9UBK8 725 aa2.66□□□□□ -1.98
RBM39-226ENST00000468086 IL20RAQ9UHF4 553 aa2.66□□□□□ -1.98
RBM39-226ENST00000468086 NOL7Q9UMY1 257 aaKnown RBP2.66□□□□□ -1.98
RBM39-226ENST00000468086 RNF6Q9Y252 685 aa2.66□□□□□ -1.98
RBM39-226ENST00000468086 USP16Q9Y5T5 823 aa2.66□□□□□ -1.98
RBM39-226ENST00000468086 CUX2O14529 1486 aa2.65□□□□□ -1.98
RBM39-226ENST00000468086 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 SYCE3A1L190 88 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 NKX2-6A6NCS4 301 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 CFAP73A6NFT4 308 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 A8MUA0 341 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 WASH3PC4AMC7 463 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 DDX39AO00148 427 aaKnown RBP2.65□□□□□ -1.99
RBM39-226ENST00000468086 LGALS8O00214 317 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 ADAM12O43184 909 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 SNAPINO95295 136 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 SLC4A1P02730 911 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 HBQ1P09105 142 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 ANXA4P09525 319 aaPredicted RBP2.65□□□□□ -1.99
RBM39-226ENST00000468086 XRCC1P18887 633 aaPredicted RBP2.65□□□□□ -1.99
RBM39-226ENST00000468086 SERPINA2P20848 420 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 RPS10P46783 165 aaKnown RBP2.65□□□□□ -1.99
RBM39-226ENST00000468086 SUCLG1P53597 346 aaKnown RBP2.65□□□□□ -1.99
RBM39-226ENST00000468086 FUT7Q11130 342 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 SHHQ15465 462 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 WASH2PQ6VEQ5 465 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 WDR88Q6ZMY6 472 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 CYS1Q717R9 158 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 SYVN1Q86TM6 617 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 FAM71E2Q8N5Q1 922 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 OR2T33Q8NG76 320 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 OR52E1Q8NGJ3 308 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 UPRTQ96BW1 309 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 CITED1Q99966 193 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 TMEM231Q9H6L2 316 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 BTNL2Q9UIR0 455 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 RPGRIP1LQ68CZ1 1315 aa2.65□□□□□ -1.99
RBM39-226ENST00000468086 THSD7BQ9C0I4 1608 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 FAM166BA8MTA8 275 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 TRAF3IP2O43734 574 aaPredicted RBP2.64□□□□□ -1.99
RBM39-226ENST00000468086 SSX5O60225 188 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 NPIPB7O75200 414 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 STX11O75558 287 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 PRDX6P30041 224 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 PRDX3P30048 256 aaKnown RBP2.64□□□□□ -1.99
RBM39-226ENST00000468086 SLC10A7Q0GE19 358 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 UNQ9370/PRO34162Q6UXP9 181 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 TMEM26Q6ZUK4 368 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 FAM220AQ7Z4H9 259 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 RNF148Q8N7C7 305 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 MDS2Q8NDY4 140 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 FAM71CQ8NEG0 241 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 SDSLQ96GA7 329 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 FAM210BQ96KR6 192 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 MCHR1Q99705 422 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 SLC17A9Q9BYT1 436 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 SYTL2Q9HCH5 934 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 PAK1IP1Q9NWT1 392 aaPredicted RBP2.64□□□□□ -1.99
RBM39-226ENST00000468086 ZNF225Q9UK10 706 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 PRPF19Q9UMS4 504 aaKnown RBP2.64□□□□□ -1.99
RBM39-226ENST00000468086 PLLPQ9Y342 182 aa2.64□□□□□ -1.99
RBM39-226ENST00000468086 ARID1AO14497 2285 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 ZNF705EA8MWA4 302 aaPredicted RBP2.63□□□□□ -1.99
RBM39-226ENST00000468086 NBR2O15453 112 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 ZNF324O75467 553 aaPredicted RBP2.63□□□□□ -1.99
RBM39-226ENST00000468086 CLUP10909 449 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 AKT2P31751 481 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 PLK1P53350 603 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 ST3GAL3Q11203 375 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 TOR1AIP1Q5JTV8 583 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 RABEPKQ7Z6M1 372 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 RDH5Q92781 318 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 RUFY1Q96T51 708 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 RNF126Q9BV68 326 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 WRAP73Q9P2S5 460 aaPredicted RBP2.63□□□□□ -1.99
RBM39-226ENST00000468086 IL19Q9UHD0 177 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 PRG3Q9Y2Y8 225 aaPredicted RBP2.63□□□□□ -1.99
RBM39-226ENST00000468086 NACAE9PAV3 2078 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 UBE4BO95155 1302 aa2.63□□□□□ -1.99
RBM39-226ENST00000468086 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.62□□□□□ -1.99
RBM39-226ENST00000468086 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.62□□□□□ -1.99
RBM39-226ENST00000468086 OR6C65A6NJZ3 312 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 ECI2O75521 394 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 INSP01308 110 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 EPHX2P34913 555 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 DLSTP36957 453 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 NTHL1P78549 312 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 WASHC5Q12768 1159 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 EXOSC2Q13868 293 aaKnown RBP2.62□□□□□ -1.99
RBM39-226ENST00000468086 GPNMBQ14956 572 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 NSDHLQ15738 373 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 NDUFA9Q16795 377 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 CASC10Q5T4H9 136 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 LIPNQ5VXI9 398 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 OR6B2Q6IFH4 312 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 RNF165Q6ZSG1 346 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 ARCQ7LC44 396 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 VRK2Q86Y07 508 aa2.62□□□□□ -1.99
RBM39-226ENST00000468086 SAXO1Q8IYX7 474 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms