RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 ADGRG7Q96K78 797 aa12.89□□□□□ -0.35
RB1-202ENST00000467505 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
RB1-202ENST00000467505 PRPF18Q99633 342 aaKnown RBP12.89□□□□□ -0.35
RB1-202ENST00000467505 USB1Q9BQ65 265 aaKnown RBP12.89□□□□□ -0.35
RB1-202ENST00000467505 TACO1Q9BSH4 297 aaKnown RBP12.89□□□□□ -0.35
RB1-202ENST00000467505 GATA5Q9BWX5 397 aaPredicted RBP12.89□□□□□ -0.35
RB1-202ENST00000467505 ACTR6Q9GZN1 396 aa12.89□□□□□ -0.35
RB1-202ENST00000467505 PIGUQ9H490 435 aa12.89□□□□□ -0.35
RB1-202ENST00000467505 GP6Q9HCN6 339 aa12.89□□□□□ -0.35
RB1-202ENST00000467505 BAIAP2L1Q9UHR4 511 aa12.89□□□□□ -0.35
RB1-202ENST00000467505 FAF1Q9UNN5 650 aaPredicted RBP12.89□□□□□ -0.35
RB1-202ENST00000467505 TRAF6Q9Y4K3 522 aa12.89□□□□□ -0.35
RB1-202ENST00000467505 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 SCAMP2O15127 329 aaKnown RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 NPHS1O60500 1241 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 LYPLA1O75608 230 aaPredicted RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 LY6G6DO95868 133 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 HMGN2P05204 90 aaKnown RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 BCKDHAP12694 445 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 AGTR1P30556 359 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 PTH2RP49190 550 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 SUMO3P55854 103 aaPredicted RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 LASP1Q14847 261 aaKnown RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 LSM12Q3MHD2 195 aaKnown RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 CDC73Q6P1J9 531 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 WFDC8Q8IUA0 241 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 GSPT2Q8IYD1 628 aaKnown RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 RIBC1Q8N443 379 aaPredicted RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 OR56A1Q8NGH5 318 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 PHOSPHO1Q8TCT1 267 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 ADAMTS15Q8TE58 950 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 OR5P2Q8WZ92 322 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 OSTF1Q92882 214 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 MOAP1Q96BY2 351 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 ARSGQ96EG1 525 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 APOPT1Q96IL0 206 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 ACTRT3Q9BYD9 372 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 TUBB1Q9H4B7 451 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 TMEM185BQ9H7F4 350 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 MKS1Q9NXB0 559 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
RB1-202ENST00000467505 GPC6Q9Y625 555 aaPredicted RBP12.88□□□□□ -0.35
RB1-202ENST00000467505 A0A0J9YW62 118 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 GTPBP1O00178 669 aaKnown RBP12.87□□□□□ -0.35
RB1-202ENST00000467505 KLF4O43474 513 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 THBDP07204 575 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 LINGO3P0C6S8 592 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 LOXP28300 417 aaPredicted RBP12.87□□□□□ -0.35
RB1-202ENST00000467505 SFTPDP35247 375 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 SERPINB5P36952 375 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 CCT3P49368 545 aaKnown RBP12.87□□□□□ -0.35
RB1-202ENST00000467505 P2RX1P51575 399 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 TP53BP2Q13625 1128 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 ZNF239Q16600 458 aaKnown RBP12.87□□□□□ -0.35
RB1-202ENST00000467505 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 ATP6AP1LQ52LC2 224 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 CCNJQ5T5M9 372 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 BHLHB9Q6PI77 547 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 ZAR1Q86SH2 424 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 SLC43A2Q8N370 569 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 ZNF611Q8N823 705 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 PPP1R14CQ8TAE6 165 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 RNF128Q8TEB7 428 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 CDS1Q92903 461 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 PLPPR2Q96GM1 343 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 C16orf58Q96GQ5 468 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 C12orf65Q9H3J6 166 aaKnown RBP12.87□□□□□ -0.35
RB1-202ENST00000467505 C12orf49Q9H741 205 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 SIRT3Q9NTG7 399 aaPredicted RBP12.87□□□□□ -0.35
RB1-202ENST00000467505 ACTL7BQ9Y614 415 aa12.87□□□□□ -0.35
RB1-202ENST00000467505 HS3ST1O14792 307 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 PIP5K1BO14986 540 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 SMAD7O15105 426 aaKnown RBP12.86□□□□□ -0.35
RB1-202ENST00000467505 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
RB1-202ENST00000467505 OPN1LWP04000 364 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 PAX1P15863 534 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 IL32P24001 234 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 SLC7A1P30825 629 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 PPP2R2BQ00005 443 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 ZNF117Q03924 483 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 FOXF1Q12946 379 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 CD226Q15762 336 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 EXOSC6Q5RKV6 272 aaKnown RBP12.86□□□□□ -0.35
RB1-202ENST00000467505 DCST2Q5T1A1 773 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 C22orf34Q6ZV56 151 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 SFXN5Q8TD22 340 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 MRGPRX4Q96LA9 322 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 ESRP2Q9H6T0 727 aaKnown RBP12.86□□□□□ -0.35
RB1-202ENST00000467505 L2HGDHQ9H9P8 463 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 FBXO34Q9NWN3 711 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 KLHL13Q9P2N7 655 aa12.86□□□□□ -0.35
RB1-202ENST00000467505 TLDC2A0PJX2 215 aa12.85□□□□□ -0.35
RB1-202ENST00000467505 ZNF195O14628 629 aa12.85□□□□□ -0.35
RB1-202ENST00000467505 PEX11AO75192 247 aa12.85□□□□□ -0.35
RB1-202ENST00000467505 PRKD3O94806 890 aa12.85□□□□□ -0.35
RB1-202ENST00000467505 FESP07332 822 aa12.85□□□□□ -0.35
RB1-202ENST00000467505 EFNA1P20827 205 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms