RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 POLR3FQ9H1D9 316 aaPredicted RBP2.53□□□□□ -2
XRN1-206ENST00000467077 PLEKHA3Q9HB20 300 aa2.53□□□□□ -2
XRN1-206ENST00000467077 HPS4Q9NQG7 708 aa2.53□□□□□ -2
XRN1-206ENST00000467077 DUS2Q9NX74 493 aaKnown RBP2.53□□□□□ -2
XRN1-206ENST00000467077 VPS54Q9P1Q0 977 aa2.53□□□□□ -2
XRN1-206ENST00000467077 WRAP73Q9P2S5 460 aaPredicted RBP2.53□□□□□ -2
XRN1-206ENST00000467077 ZNF346Q9UL40 294 aaKnown RBP2.53□□□□□ -2
XRN1-206ENST00000467077 NAALAD2Q9Y3Q0 740 aa2.53□□□□□ -2
XRN1-206ENST00000467077 ZFYVE26Q68DK2 2539 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 IGF2RP11717 2491 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 CNOT1A5YKK6 2376 aaKnown RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 PLXNA2O75051 1894 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 UTP20O75691 2785 aaKnown RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 A0A087X0K7 114 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 KLF18A0A0U1RQI7 1052 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 SMIM28A0A1B0GU29 152 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 C2orf92A0A1B0GVN3 265 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 LOC390937A0A1W2PQ73 354 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 A0A1W2PRV1 198 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 IGLON5A6NGN9 336 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 K7EQS6 105 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 FBP2O00757 339 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 SLC37A4O43826 429 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 GRAP2O75791 330 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 SLITRK3O94933 977 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 LETM1O95202 739 aaPredicted RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 HCKP08631 526 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ANPEPP15144 967 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 GNSP15586 552 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 GLRA2P23416 452 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 OAS2P29728 719 aaKnown RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 ARL2P36404 184 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 IFNAR2P48551 515 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 TUFMP49411 452 aaKnown RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 SERPINH1P50454 418 aaKnown RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 PEX3P56589 373 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 KRTAP10-10P60014 251 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 SEMG2Q02383 582 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ZNF33AQ06730 810 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 MORF4L2Q15014 288 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 PDGFRLQ15198 375 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 DCAF4L1Q3SXM0 396 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 RFTN2Q52LD8 501 aaPredicted RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 NHLRC3Q5JS37 347 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 CENPPQ6IPU0 288 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ARMCX5Q6P1M9 558 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 RFPL4BQ6ZWI9 263 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ASPGQ86U10 573 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 UNC45BQ8IWX7 931 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 CMTM8Q8IZV2 173 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ALLCQ8N6M5 410 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 TMEM99Q8N816 258 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 OR6F1Q8NGZ6 308 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 KIAA1524Q8TCG1 905 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 LIPHQ8WWY8 451 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 PSMG2Q969U7 264 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 SLC35C1Q96A29 364 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 C18orf25Q96B23 403 aaPredicted RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 BPIFA2Q96DR5 249 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 PHYHIPLQ96FC7 376 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 EPSTI1Q96J88 318 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 RUNDC3BQ96NL0 473 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 RCHY1Q96PM5 261 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 TCHPQ9BT92 498 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 CCDC94Q9BW85 323 aaPredicted RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 OSBPL8Q9BZF1 889 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 SLC5A7Q9GZV3 580 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 RWDD1Q9H446 243 aaPredicted RBP2.52□□□□□ -2.01
XRN1-206ENST00000467077 PRORYQ9H606 182 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ECT2Q9H8V3 914 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 SP140LQ9H930 580 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ZDHHC4Q9NPG8 344 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 XPNPEP1Q9NQW7 623 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 MMP17Q9ULZ9 603 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 CCL26Q9Y258 94 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 ASB3Q9Y575 518 aa2.52□□□□□ -2.01
XRN1-206ENST00000467077 PIEZO2Q9H5I5 2752 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 SCN1AP35498 2009 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 CCDC162PA2VCL2 907 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 K7ERI5 159 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 SGK1O00141 431 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 KLF8O95600 359 aaPredicted RBP2.51□□□□□ -2.01
XRN1-206ENST00000467077 IGHDP01880 384 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 HOXC4P09017 264 aaPredicted RBP2.51□□□□□ -2.01
XRN1-206ENST00000467077 KCNE1P15382 129 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 ATF6P18850 670 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 NAMPTP43490 491 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 RPS27AP62979 156 aaKnown RBP2.51□□□□□ -2.01
XRN1-206ENST00000467077 SPAG1Q07617 926 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 SLC3A1Q07837 685 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 RBBP4Q09028 425 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 CCDC173Q0VFZ6 552 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 CEACAM7Q14002 265 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 FASTKQ14296 549 aaKnown RBP2.51□□□□□ -2.01
XRN1-206ENST00000467077 ACKR1Q16570 336 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 SGCBQ16585 318 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 FUT11Q495W5 492 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 ODF2Q5BJF6 829 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 EOGTQ5NDL2 527 aa2.51□□□□□ -2.01
XRN1-206ENST00000467077 LINC00242Q5T6M2 205 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms