RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 ZNF783Q6ZMS7 281 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 GHSRQ92847 366 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 ATOH1Q92858 354 aaPredicted RBP12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 DPYSL5Q9BPU6 564 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 GINS4Q9BRT9 223 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 TRMT61BQ9BVS5 477 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 EVA1AQ9H8M9 152 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 SCPEP1Q9HB40 452 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 HRASLSQ9HDD0 168 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 WSB2Q9NYS7 404 aaPredicted RBP12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 MARK1Q9P0L2 795 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 NFKBIL1Q9UBC1 381 aaPredicted RBP12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 FBXL4Q9UKA2 621 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 EXOGQ9Y2C4 368 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 NPTNQ9Y639 398 aa12.99□□□□□ -0.33
TGFBR3-204ENST00000465892 DNASE2O00115 360 aaPredicted RBP12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 TMPRSS11DO60235 418 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 FMO6PO60774 539 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 PSMB1P20618 241 aaKnown RBP12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 MAGEB1P43366 347 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 CBX5P45973 191 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 CCR9P51686 369 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 CLDN2P57739 230 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 FUT5Q11128 374 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 TMEM115Q12893 351 aaPredicted RBP12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 PGGHGQ32M88 737 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 ZNF311Q5JNZ3 666 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 ZNF697Q5TEC3 545 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 TMEM88Q6PEY1 159 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 CYB561A3Q8NBI2 242 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 LRRC46Q96FV0 321 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 NOX3Q9HBY0 568 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 SLC13A4Q9UKG4 626 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 RNF215Q9Y6U7 377 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 INPPL1O15357 1258 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 RAB3AP20336 220 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 MAPK8P45983 427 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 ERVK-25P63136 954 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 SLC22A10Q63ZE4 541 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 SLITRK4Q8IW52 837 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 OR5M1Q8NGP8 315 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 OR5J2Q8NH18 312 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 HERVK_113Q902F9 699 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 C12orf57Q99622 126 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 SPATA5L1Q9BVQ7 753 aa12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 ZNF768Q9H5H4 540 aaKnown RBP12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 ING1Q9UK53 422 aaPredicted RBP12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 MRTO4Q9UKD2 239 aaKnown RBP12.98□□□□□ -0.33
TGFBR3-204ENST00000465892 SPTBP11277 2137 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 KHDRBS3O75525 346 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 RP2O75695 350 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 HMGN2P05204 90 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 FGF2P09038 288 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 S100A11P31949 105 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 ACSM1Q08AH1 577 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 C2orf68Q2NKX9 166 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 HES5Q5TA89 166 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 ZDHHC20Q5W0Z9 365 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 TRAPPC5Q8IUR0 188 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 RFLNBQ8N5W9 214 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 CLRN3Q8NCR9 226 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 KCTD12Q96CX2 325 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 NEUROD4Q9HD90 331 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 PCDHGA5Q9Y5G8 931 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 SLC5A10A0PJK1 596 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 OR6C74A6NCV1 312 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 SDC3O75056 442 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 DUSP11O75319 330 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 HLA-FP30511 346 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 TMUB2Q71RG4 321 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 MRGPREQ86SM8 312 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 CMTM4Q8IZR5 234 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 OR2T33Q8NG76 320 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 OSTF1Q92882 214 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 MRPS24Q96EL2 167 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 SLC38A3Q99624 504 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 ACTR6Q9GZN1 396 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 SLC6A17Q9H1V8 727 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 ZNF106Q9H2Y7 1883 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 GLIPR2Q9H4G4 154 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
TGFBR3-204ENST00000465892 AIPO00170 330 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 SMAD9O15198 467 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 OR5F1O95221 314 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 EOMESO95936 686 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 CKMP06732 381 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 IFNGR2P38484 337 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 NCBP2P52298 156 aaKnown RBP eCLIP12.96□□□□□ -0.331e-18■□□□□ 8.9
TGFBR3-204ENST00000465892 PITPNAQ00169 270 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 LINC00303Q3SY05 128 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 ELP2Q6IA86 826 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 C22orf39Q6P5X5 142 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 RASGRP3Q8IV61 690 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
TGFBR3-204ENST00000465892 HDDC3Q8N4P3 179 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms