RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 RRAGDQ9NQL2 400 aaPredicted RBP8.67□□□□□ -1.02
USP39-212ENST00000465514 DCDC2Q9UHG0 476 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 KCNS2Q9ULS6 477 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 A0A087WZY1 265 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 A0A1W2PPM1 405 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 ALG1L2C9J202 215 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 CLOCKO15516 846 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 PDPK1O15530 556 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 RIPK2O43353 540 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 NDUFB5O43674 189 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 CXCL13O43927 109 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 SS18L1O75177 396 aaPredicted RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 RSL1D1O76021 490 aaKnown RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 NKX2-2O95096 273 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 SYNGR4O95473 234 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 IFI6P09912 130 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 PPP3CBP16298 524 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 ZNF17P17021 662 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 IL11P20809 199 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 GPC1P35052 558 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 MAP3K8P41279 467 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 NUDT6P53370 316 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 PRKAG1P54619 331 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 SLC29A2Q14542 456 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 KIAA0040Q15053 153 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 CTU2Q2VPK5 515 aaKnown RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 CFAP157Q5JU67 520 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 CPTPQ5TA50 214 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 FAM166AQ6J272 317 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 ANKRD26P1Q6NSI1 321 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 ADAM5Q6NVV9 412 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 CLEC2AQ6UVW9 174 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 ZYG11AQ6WRX3 759 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 FRMD7Q6ZUT3 714 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 GTPBP8Q8N3Z3 284 aaPredicted RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 GATSQ8NAP1 163 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 OR4C3Q8NH37 302 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 CEP70Q8NHQ1 597 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 MZB1Q8WU39 189 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 HOXB13Q92826 284 aaPredicted RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 CIDECQ96AQ7 238 aaPredicted RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 CCDC126Q96EE4 140 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 ADGRG7Q96K78 797 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 MANSC1Q9H8J5 431 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 EML4Q9HC35 981 aaKnown RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 TNFRSF12AQ9NP84 129 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 PSMC3IPQ9P2W1 217 aaPredicted RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 TBK1Q9UHD2 729 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 MCTS1Q9ULC4 181 aaKnown RBP8.66□□□□□ -1.02
USP39-212ENST00000465514 CCL27Q9Y4X3 112 aa8.66□□□□□ -1.02
USP39-212ENST00000465514 A0A0J9YW62 118 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 A0A1W2PRB8 838 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.02
USP39-212ENST00000465514 H3BQF6 201 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 TNFSF11O14788 317 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ADAMDEC1O15204 470 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 AKAP10O43572 662 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 KIAA0513O60268 411 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 KCNK2O95069 426 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 OXSR1O95747 527 aaPredicted RBP8.65□□□□□ -1.02
USP39-212ENST00000465514 PROCP04070 461 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 NGFRP08138 427 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 FAM153BP0C7A2 387 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 UROSP10746 265 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ACP2P11117 423 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 PSMA4P25789 261 aaKnown RBP8.65□□□□□ -1.02
USP39-212ENST00000465514 DNAJB13P59910 316 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 NAA20P61599 178 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 RAC1P63000 192 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 SLC18A2Q05940 514 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 PGGHGQ32M88 737 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 PLPPR5Q32ZL2 321 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 FAM153CQ494X1 144 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 VPS26BQ4G0F5 336 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ZNF385BQ569K4 471 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 PRR31Q5SQ13 230 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 CLEC6AQ6EIG7 209 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ALKBH2Q6NS38 261 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 MFSD12Q6NUT3 480 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 FIGNL1Q6PIW4 674 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 BEND4Q6ZU67 534 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ZAR1Q86SH2 424 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 CDRT4Q8N9R6 151 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 SLC16A11Q8NCK7 471 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 NUP43Q8NFH3 380 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ELOA3Q8NG57 546 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 OR2V1Q8NHB1 315 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 FBXO30Q8TB52 745 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 FAM110BQ8TC76 370 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ZBTB8AQ96BR9 441 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 SH3YL1Q96HL8 342 aaPredicted RBP8.65□□□□□ -1.02
USP39-212ENST00000465514 METTL2AQ96IZ6 378 aaKnown RBP8.65□□□□□ -1.02
USP39-212ENST00000465514 RNF145Q96MT1 663 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 KLHDC3Q9BQ90 382 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 ACTR6Q9GZN1 396 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 TMEM185BQ9H7F4 350 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 HHATLQ9HCP6 504 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 FANCFQ9NPI8 374 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 GLRX2Q9NS18 164 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms