RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ARAFP10398 606 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 UBL4AP11441 157 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 HK1P19367 917 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 CRISP3P54108 245 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 WLSQ5T9L3 541 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 PRAMEF8Q5VWM4 474 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 PRAMEF7Q5VXH5 474 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 MTDHQ86UE4 582 aaKnown RBP18.41■□□□□ 0.54
SKA3-205ENST00000465471 ZNF614Q8N883 585 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 TOR1AIP2Q8NFQ8 470 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 OR5M9Q8NGP3 310 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 PHF10Q8WUB8 498 aaKnown RBP18.41■□□□□ 0.54
SKA3-205ENST00000465471 ABTB1Q969K4 478 aaPredicted RBP18.41■□□□□ 0.54
SKA3-205ENST00000465471 TMEM19Q96HH6 336 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 SH3YL1Q96HL8 342 aaPredicted RBP18.41■□□□□ 0.54
SKA3-205ENST00000465471 TREX2Q9BQ50 279 aaPredicted RBP18.41■□□□□ 0.54
SKA3-205ENST00000465471 VKORC1Q9BQB6 163 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 MTHFD2LQ9H903 347 aaPredicted RBP18.41■□□□□ 0.54
SKA3-205ENST00000465471 BCL2L10Q9HD36 194 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 CARD8Q9Y2G2 431 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 PHF3Q92576 2039 aaKnown RBP18.4■□□□□ 0.54
SKA3-205ENST00000465471 FIGNL2A6NMB9 653 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 EVPLLA8MZ36 301 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 ZNF264O43296 627 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 SHOX2O60902 331 aaPredicted RBP18.4■□□□□ 0.54
SKA3-205ENST00000465471 WDR1O75083 606 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 NPPAP01160 153 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 PGM1P36871 562 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 LHX2P50458 406 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 P2RX1P51575 399 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 CYLC2Q14093 348 aaPredicted RBP18.4■□□□□ 0.54
SKA3-205ENST00000465471 SELPLGQ14242 412 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 ADRM1Q16186 407 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 PLPPR5Q32ZL2 321 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 NDUFAF6Q330K2 333 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 GCNT6Q5T4J0 391 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 EIF3MQ7L2H7 374 aaKnown RBP18.4■□□□□ 0.54
SKA3-205ENST00000465471 TREML1Q86YW5 311 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 METTL25Q8N6Q8 603 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 RP9Q8TA86 221 aaKnown RBP18.4■□□□□ 0.54
SKA3-205ENST00000465471 SSC4DQ8WTU2 575 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 MAL2Q969L2 176 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 ARSGQ96EG1 525 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 WDYHV1Q96HA8 205 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 CCDC120Q96HB5 630 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 SFXN2Q96NB2 322 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 LAT2Q9GZY6 243 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 TMEM38AQ9H6F2 299 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 MED17Q9NVC6 651 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 SLC35A3Q9Y2D2 325 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 RPH3AQ9Y2J0 694 aaPredicted RBP18.4■□□□□ 0.54
SKA3-205ENST00000465471 FAM215AQ9Y5M1 114 aa18.4■□□□□ 0.54
SKA3-205ENST00000465471 A0A0G2JPF8 293 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 LOC100653049A0A140TA62 436 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 HNRNPCL2B2RXH8 293 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 HNRNPCL3B7ZW38 293 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 LINC01387J3KSC0 135 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 ETV2O00321 342 aaPredicted RBP18.39■□□□□ 0.53
SKA3-205ENST00000465471 MRASO14807 208 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 HNRNPCL1O60812 293 aaKnown RBP18.39■□□□□ 0.53
SKA3-205ENST00000465471 BCAS1O75363 584 aaPredicted RBP18.39■□□□□ 0.53
SKA3-205ENST00000465471 KRT34O76011 436 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 CSTAP01040 98 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 LINGO3P0C6S8 592 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 HNRNPCL4P0DMR1 293 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 CPN1P15169 458 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 ZNF17P17021 662 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 PSMA4P25789 261 aaKnown RBP18.39■□□□□ 0.53
SKA3-205ENST00000465471 GCKP35557 465 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 PER3P56645 1201 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 MTPNP58546 118 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 KCNJ10P78508 379 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 GNA13Q14344 377 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 RTL6Q6ICC9 239 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 MTFR2Q6P444 385 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 AAGABQ6PD74 315 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 C3P1Q6ZMU1 363 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 HMGN2P46Q86SG4 172 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 CMIPQ8IY22 773 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 PM20D2Q8IYS1 436 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 ULK2Q8IYT8 1036 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 EID3Q8N140 333 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 GTPBP8Q8N3Z3 284 aaPredicted RBP18.39■□□□□ 0.53
SKA3-205ENST00000465471 MARVELD2Q8N4S9 558 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 ZBTB8AQ96BR9 441 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 LRRC58Q96CX6 371 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 PIGQQ9BRB3 760 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 TRIM8Q9BZR9 551 aa18.39■□□□□ 0.53
SKA3-205ENST00000465471 KAT8Q9H7Z6 458 aaKnown RBP18.39■□□□□ 0.53
SKA3-205ENST00000465471 OR2M5A3KFT3 312 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 TMEM247A6NEH6 219 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 GTPBP1O00178 669 aaKnown RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 GMFGO60234 142 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 DBIP07108 87 aaKnown RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 HOXD4P09016 255 aaPredicted RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 NID1P14543 1247 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 GABRA1P14867 456 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 ZNF708P17019 499 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 ACVR2AP27037 513 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 PTGER4P35408 488 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms