RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 BLOC1S6Q9UL45 172 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 POFUT2Q9Y2G5 429 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 IFT52Q9Y366 437 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 MMACHCQ9Y4U1 282 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 GADD45GO95257 159 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 CHRM4P08173 479 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 IFNA8P32881 189 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 RYKP34925 604 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 RPL5P46777 297 aaKnown RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 LIMS1P48059 325 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 CDH12P55289 794 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 SNRPNP63162 240 aaKnown RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 FUT5Q11128 374 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 SLC13A2Q13183 592 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 TOP3AQ13472 1001 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 APOFQ13790 326 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 ZNHIT3Q15649 155 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 DUSP7Q16829 419 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 MICAQ29983 383 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 PRICKLE4Q2TBC4 344 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 ARHGAP11BQ3KRB8 267 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 EIPR1Q53HC9 387 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 RBM48Q5RL73 367 aaKnown RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 RHBDD2Q6NTF9 364 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 DHRS4L2Q6PKH6 230 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 FAM111BQ6SJ93 734 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 SHISA6Q6ZSJ9 500 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 GALNT12Q8IXK2 581 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 TAGAPQ8N103 731 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 AMER2Q8N7J2 671 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 CHDHQ8NE62 594 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 TSPAN14Q8NG11 270 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 GPR32P1Q8NGA4 272 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 OR10G2Q8NGC3 310 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 OR1N1Q8NGS0 311 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 ANKRD9Q96BM1 317 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 CTHRC1Q96CG8 243 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 MMABQ96EY8 250 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 C16orf58Q96GQ5 468 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 DHRS1Q96LJ7 313 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 GABARAPL3Q9BY60 117 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 AMBRA1Q9C0C7 1298 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 MTHFD2LQ9H903 347 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 ZNF556Q9HAH1 456 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 PRTFDC1Q9NRG1 225 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 CUTCQ9NTM9 273 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 MAT2BQ9NZL9 334 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 SERTAD3Q9UJW9 196 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 TMCC3Q9ULS5 477 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 TESMINQ9Y4I5 508 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 MAGED1Q9Y5V3 778 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 HS3ST3B1Q9Y662 390 aa12.73□□□□□ -0.37
HDAC6-215ENST00000465457 INTS1Q8N201 2190 aaKnown RBP12.73□□□□□ -0.37
HDAC6-215ENST00000465457 ABCA4P78363 2273 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 A0A087WXM4 84 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 LOC100130705A0A1B0GUX0 176 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 SMIM31A0A1B0GVY4 71 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 A0A1W2PS29 197 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 PRAMEF27A3QJZ7 478 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 TRIM64A6NGJ6 449 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 FAAHO00519 579 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 BCKDKO14874 412 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 LDB3O75112 727 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 DIRAS1O95057 198 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 CCNB2O95067 398 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 F10P00742 488 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 IGHEP01854 428 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 THBS1P07996 1170 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 GNAO1P09471 354 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 PABPC4LP0CB38 370 aaKnown RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 SMIM18P0DKX4 95 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 STT3AP46977 705 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 OR1E2P47887 323 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 ART1P52961 327 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 NR1H2P55055 460 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 DCDP81605 110 aaKnown RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 NKAIN1Q4KMZ8 207 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 KIRREL2Q6UWL6 708 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 RPTNQ6XPR3 784 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 TSEN54Q7Z6J9 526 aaKnown RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 OR4N5Q8IXE1 308 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 PEX5LQ8IYB4 626 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 HS3ST5Q8IZT8 346 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 ZNF786Q8N393 782 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 TMEM52Q8NDY8 209 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 HOXB13Q92826 284 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 RBM18Q96H35 190 aaKnown RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 FBXL20Q96IG2 436 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 THOC3Q96J01 351 aaKnown RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 DGAT2Q96PD7 388 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 YIPF4Q9BSR8 244 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 NDC1Q9BTX1 674 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 POLR2J2Q9GZM3 115 aaKnown RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 POLR2J3Q9H1A7 115 aaKnown RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 SLC38A1Q9H2H9 487 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 ARMC7Q9H6L4 198 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 PLA2G3Q9NZ20 509 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 HCN3Q9P1Z3 774 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 TINAGQ9UJW2 476 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms