RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CD226Q15762 336 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.44■□□□□ 0.06
VPS52-215ENST00000464425 ATAD3BQ5T9A4 648 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 HEPHL1Q6MZM0 1159 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 HACD2Q6Y1H2 254 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 CCDC71Q8IV32 467 aaPredicted RBP15.44■□□□□ 0.06
VPS52-215ENST00000464425 CHDHQ8NE62 594 aaPredicted RBP15.44■□□□□ 0.06
VPS52-215ENST00000464425 RCN3Q96D15 328 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 C1GALT1C1Q96EU7 318 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 SH3YL1Q96HL8 342 aaPredicted RBP15.44■□□□□ 0.06
VPS52-215ENST00000464425 SH3GL1Q99961 368 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 COQ3Q9NZJ6 369 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.44■□□□□ 0.06
VPS52-215ENST00000464425 TAGLN3Q9UI15 199 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 PCNX3Q9H6A9 2034 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 IGLV3-32A0A0A0MS00 114 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 AHRRA9YTQ3 701 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 KDM4EB2RXH2 506 aaPredicted RBP15.43■□□□□ 0.06
VPS52-215ENST00000464425 PRSS44E7EML9 344 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 AIM2O14862 343 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 STX11O75558 287 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 HOXD4P09016 255 aaPredicted RBP15.43■□□□□ 0.06
VPS52-215ENST00000464425 BMP2P12643 396 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 CRATP43155 626 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ATP12AP54707 1039 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 GFRA1P56159 465 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 B3GALT5-AS1P59052 145 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ART3Q13508 389 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ARHGAP11BQ3KRB8 267 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 KLHL26Q53HC5 615 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 COX20Q5RI15 118 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 RAET1LQ5VY80 246 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 NANOGP8Q6NSW7 305 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 AAGABQ6PD74 315 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ENPP6Q6UWR7 440 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ARSKQ6UWY0 536 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 TRPM8Q7Z2W7 1104 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 PM20D2Q8IYS1 436 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ZNF614Q8N883 585 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ZNF527Q8NB42 609 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 OR8J3Q8NGG0 315 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 PHOSPHO1Q8TCT1 267 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 CPPED1Q9BRF8 314 aaPredicted RBP15.43■□□□□ 0.06
VPS52-215ENST00000464425 PRDM14Q9GZV8 571 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 NANOGQ9H9S0 305 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 ARL8BQ9NVJ2 186 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 MKLN1Q9UL63 735 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 LIPT1Q9Y234 373 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 RNF6Q9Y252 685 aa15.43■□□□□ 0.06
VPS52-215ENST00000464425 NCOA6Q14686 2063 aaPredicted RBP15.42■□□□□ 0.06
VPS52-215ENST00000464425 A0A1W2PQD3 144 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 SHISA8B8ZZ34 492 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 FXYD1O00168 92 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 HCRTR2O43614 444 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 AGAP20933 346 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 PTGER4P35408 488 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 MNAT1P51948 309 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 GANABQ14697 944 aaKnown RBP15.42■□□□□ 0.06
VPS52-215ENST00000464425 ACSF3Q4G176 576 aaPredicted RBP15.42■□□□□ 0.06
VPS52-215ENST00000464425 MISPQ8IVT2 679 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 CA5BP1Q8WTZ4 195 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 HOPXQ9BPY8 73 aaPredicted RBP15.42■□□□□ 0.06
VPS52-215ENST00000464425 THUMPD3Q9BV44 507 aaKnown RBP15.42■□□□□ 0.06
VPS52-215ENST00000464425 IKZF5Q9H5V7 419 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 POLE3Q9NRF9 147 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 VDAC3Q9Y277 283 aa15.42■□□□□ 0.06
VPS52-215ENST00000464425 PRAMEF27A3QJZ7 478 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 NPIPB9F8W1W9 429 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 H0Y3Z8 333 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 H3BNH8 94 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 GTPBP1O00178 669 aaKnown RBP15.41■□□□□ 0.06
VPS52-215ENST00000464425 OIP5O43482 229 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 TNFRSF21O75509 655 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 CLDN14O95500 239 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 ETFAP13804 333 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 CPN1P15169 458 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 CHMP24386 653 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 MSX1P28360 303 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 HTR1EP28566 365 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 GRNP28799 593 aaKnown RBP15.41■□□□□ 0.06
VPS52-215ENST00000464425 ADH7P40394 386 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 LHX2P50458 406 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 DSTNP60981 165 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 FUT5Q11128 374 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 CAPRIN1Q14444 709 aaKnown RBP15.41■□□□□ 0.06
VPS52-215ENST00000464425 NDUFAF6Q330K2 333 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 GPAT3Q53EU6 434 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 PDZK1Q5T2W1 519 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 C8orf82Q6P1X6 216 aaPredicted RBP15.41■□□□□ 0.06
VPS52-215ENST00000464425 SEM1Q6ZVN7 128 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 HMGN2P46Q86SG4 172 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 B4GALNT2Q8NHY0 566 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 PMM1Q92871 262 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 NSL1Q96IY1 281 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 TRNT1Q96Q11 434 aaKnown RBP15.41■□□□□ 0.06
VPS52-215ENST00000464425 TRIB1Q96RU8 372 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 KLHDC3Q9BQ90 382 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 GPATCH1Q9BRR8 931 aaKnown RBP15.41■□□□□ 0.06
VPS52-215ENST00000464425 ZNF350Q9GZX5 532 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 KAT8Q9H7Z6 458 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms