RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SOHLH2Q9NX45 425 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 TEX10Q9NXF1 929 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CLDN16Q9Y5I7 305 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 AP1M2Q9Y6Q5 423 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 MAP1AP78559 2803 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CNTRLQ7Z7A1 2325 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 MYO7BQ6PIF6 2116 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 FER1L5A0AVI2 2057 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 HEATR5BQ9P2D3 2071 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 A0A0A6YYC8 382 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 A0A0A6YYD5 115 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PABPN1LA6NDY0 278 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 A8MVJ9 347 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TMEM150CB9EJG8 249 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 I3L1I5 382 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SGK494L7N484 410 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PEX12O00623 359 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 RRHO14718 337 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF749O43361 778 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ERI3O43414 337 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 RDH16O75452 317 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CRCPO75575 148 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 LRATO95237 230 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TGDSO95455 350 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 KLK1P06870 262 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 UMODP07911 640 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CD63P08962 238 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 G6PDP11413 515 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 BCKDHAP12694 445 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 EZRP15311 586 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 OTX2P32243 289 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 OR1D4P47884 311 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 UFM1P61960 85 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ASPHQ12797 758 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 AIMP2Q13155 320 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 AP5B1Q2VPB7 878 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 DEFB134Q4QY38 66 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 C1orf189Q5VU69 101 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 AGAP7PQ5VUJ5 663 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 IL23RQ5VWK5 629 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 KHDRBS2Q5VWX1 349 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 RUSC1-AS1Q66K80 236 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 C18orf63Q68DL7 685 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 RNF165Q6ZSG1 346 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 COMMD6Q7Z4G1 85 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ANKRD13BQ86YJ7 626 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 METTL4Q8N3J2 472 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 LIX1Q8N485 282 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 RAB42Q8N4Z0 105 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CSNK1A1LQ8N752 337 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CATSPER1Q8NEC5 780 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 OR2Y1Q8NGV0 311 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 NT5CQ8TCD5 201 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 BCAS4Q8TDM0 211 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SLC13A3Q8WWT9 602 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TUBGCP3Q96CW5 907 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 AGAP4Q96P64 663 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TSSK3Q96PN8 268 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 MAPKAP1Q9BPZ7 522 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PCBD2Q9H0N5 130 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 LRTM1Q9HBL6 345 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 EML4Q9HC35 981 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TCF7L2Q9NQB0 619 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SAR1AQ9NR31 198 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SLC6A13Q9NSD5 602 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ARL8BQ9NVJ2 186 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 AIG1Q9NVV5 245 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 HCN3Q9P1Z3 774 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PADI2Q9Y2J8 665 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ATG4BQ9Y4P1 393 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SIRT4Q9Y6E7 314 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 MAU2Q9Y6X3 613 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 JMJD1CQ15652 2540 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PCM1Q15154 2024 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 FBN1P35555 2871 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CSPG4Q6UVK1 2322 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ABCA4P78363 2273 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TRGV8A0A0C4DH27 118 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ANKDD1BA6NHY2 528 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 GLOD5A6NK44 160 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 H3BNX3 289 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 FOXE1O00358 373 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 FBP2O00757 339 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PCDH7O60245 1069 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 GALR3O60755 368 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 B4GALT2O60909 372 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SEC22BO75396 215 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CCNDBP1O95273 360 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CLDN14O95500 239 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 KRT6AP02538 564 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 MBPP02686 304 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 KRT6BP04259 564 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 IL3P08700 152 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 HBQ1P09105 142 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TMEM225BP0DP42 221 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PSG1P11464 419 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 IGFBP2P18065 325 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 KLK2P20151 261 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 GPX3P22352 226 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms