RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SLC39A3Q9BRY0 314 aa10.7□□□□□ -0.7
RTCB-202ENST00000463455 YIPF4Q9BSR8 244 aa10.7□□□□□ -0.7
RTCB-202ENST00000463455 NMUR2Q9GZQ4 415 aa10.7□□□□□ -0.7
RTCB-202ENST00000463455 MED17Q9NVC6 651 aa10.7□□□□□ -0.7
RTCB-202ENST00000463455 MCTS1Q9ULC4 181 aaKnown RBP10.7□□□□□ -0.7
RTCB-202ENST00000463455 VDAC3Q9Y277 283 aa10.7□□□□□ -0.7
RTCB-202ENST00000463455 MTORP42345 2549 aa10.7□□□□□ -0.7
RTCB-202ENST00000463455 SH3D21A4FU49 640 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 NPIPB9F8W1W9 429 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 CASKO14936 926 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 ITM2AO43736 263 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 AGR2O95994 175 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 CGAP01215 116 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 LINGO3P0C6S8 592 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 PABPC4LP0CB38 370 aaKnown RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 IL11P20809 199 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 EFNA1P20827 205 aaPredicted RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 CD79BP40259 229 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 SLC1A6P48664 564 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 P2RX1P51575 399 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 CLNS1AP54105 237 aaKnown RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 SLC18A1P54219 525 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 ATP12AP54707 1039 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 HBA1P69905 142 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 SNTB1Q13884 538 aaKnown RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 PON3Q15166 354 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 PDCD2Q16342 344 aaPredicted RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 ANXA8L1Q5VT79 327 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 OGFOD2Q6N063 350 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 PAMR1Q6UXH9 720 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 FAM214BQ7L5A3 538 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 ZAR1Q86SH2 424 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 CNEP1R1Q8N9A8 125 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 TOR1AIP2Q8NFQ8 470 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 LINC01560Q8TB33 94 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 FNDC9Q8TBE3 224 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 MIPOL1Q8TD10 442 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 CDS1Q92903 461 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 CHMP6Q96FZ7 201 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 GMPPAQ96IJ6 420 aaPredicted RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 SORT1Q99523 831 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 AKTIPQ9H8T0 292 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 MEAF6Q9HAF1 191 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 FANCFQ9NPI8 374 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 POLE3Q9NRF9 147 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.69□□□□□ -0.7
RTCB-202ENST00000463455 PCDHGB4Q9UN71 923 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 EMC9Q9Y3B6 208 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 TESMINQ9Y4I5 508 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 GPC6Q9Y625 555 aaPredicted RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 V9GYY5 206 aaPredicted RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 PRRC2AP48634 2157 aaKnown RBP10.69□□□□□ -0.7
RTCB-202ENST00000463455 ITPR3Q14573 2671 aa10.69□□□□□ -0.7
RTCB-202ENST00000463455 GJE1A6NN92 205 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 H0YC42 278 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 ETV2O00321 342 aaPredicted RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 EIF1AYO14602 144 aaKnown RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 CFLARO15519 480 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 EIF4E2O60573 245 aaKnown RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 RAF1P04049 648 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 HRGP04196 525 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 CPOXP36551 454 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 EIF1AXP47813 144 aaKnown RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 TXNL4AP83876 142 aaKnown RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 PRR20EP86478 221 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 PRR20CP86479 221 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 PRR20DP86480 221 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 PRR20BP86481 221 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 PRR20AP86496 221 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 ZNF117Q03924 483 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 LRRC74AQ0VAA2 488 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 STX3Q13277 289 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 CD226Q15762 336 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 CTU2Q2VPK5 515 aaKnown RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 CCNJQ5T5M9 372 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 FBXW10Q5XX13 1052 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 AP1ARQ63HQ0 302 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 GTF2IRD2BQ6EKJ0 949 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 VWA1Q6PCB0 445 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 BTLAQ7Z6A9 289 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 GALNT10Q86SR1 603 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 GTF2IRD2Q86UP8 949 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 OR5M1Q8NGP8 315 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 OR6K3Q8NGY3 331 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 OR10D3Q8NH80 312 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 OR2V1Q8NHB1 315 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 RAB3IL1Q8TBN0 382 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 PHOSPHO1Q8TCT1 267 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 ARSGQ96EG1 525 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 RNF145Q96MT1 663 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 DPY30Q9C005 99 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 ZNF395Q9H8N7 513 aaPredicted RBP10.68□□□□□ -0.7
RTCB-202ENST00000463455 GP6Q9HCN6 339 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 TIGARQ9NQ88 270 aa10.68□□□□□ -0.7
RTCB-202ENST00000463455 EXD2Q9NVH0 621 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms