RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TOXO94900 526 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 RCBTB2O95199 551 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 GOSR1O95249 250 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 UBTFL6P0CB48 400 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 OR12D1P0DN82 309 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 TROVE2P10155 538 aaKnown RBP eCLIP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 TFPIP10646 304 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 POU2F1P14859 743 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 IL7RP16871 459 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 PPIBP23284 216 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 FKBP2P26885 142 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ADH6P28332 368 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CEACAM8P31997 349 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SFTPDP35247 375 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CRATP43155 626 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 MAGEA8P43361 318 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 POLR2JP52435 117 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CRISP3P54108 245 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 GAS1P54826 345 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CARD18P57730 90 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 RPS26P62854 115 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 RAC1P63000 192 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CSNK2A1P68400 391 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SIRPAP78324 504 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SORDQ00796 357 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SELENBP1Q13228 472 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 LARS2Q15031 903 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 PRSS53Q2L4Q9 553 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ARHGAP11BQ3KRB8 267 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 TMEM201Q5SNT2 666 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 C3orf33Q6P1S2 294 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 TNFAIP8L2Q6P589 184 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 MSANTD1Q6ZTZ1 278 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ZZZ3Q8IYH5 903 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 GCNT2Q8N0V5 402 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 LILRA2Q8N149 483 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ZNF619Q8N2I2 560 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 GTPBP8Q8N3Z3 284 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ATP6V1C2Q8NEY4 427 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 OR5M1Q8NGP8 315 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 OR4C3Q8NH37 302 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 OR5W2Q8NH69 310 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CPNE4Q96A23 557 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ROPN1LQ96C74 230 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 MRGPRX4Q96LA9 322 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 KLHL15Q96M94 604 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CCDC115Q96NT0 180 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SIKE1Q9BRV8 207 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 MED18Q9BUE0 208 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 POLDIP3Q9BY77 421 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ENKD1Q9H0I2 346 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 WDR55Q9H6Y2 383 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ZNF395Q9H8N7 513 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SIRT3Q9NTG7 399 aaPredicted RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 GPATCH2Q9NW75 528 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ZNF226Q9NYT6 803 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 FLRT3Q9NZU0 649 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SELENONQ9NZV5 590 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ITGB1BP2Q9UKP3 347 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 CARD8Q9Y2G2 431 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ZNF337Q9Y3M9 751 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 ZGRF1Q86YA3 2104 aa8.09□□□□□ -1.11
DDX39B-216ENST00000462421 SPTAN1Q13813 2472 aaKnown RBP8.09□□□□□ -1.11
DDX39B-216ENST00000462421 RELNP78509 3460 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 USP9XQ93008 2570 aaPredicted RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 SPENQ96T58 3664 aaKnown RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 C7orf72A4D263 438 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 SERINC4A6NH21 518 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 C19orf84I3L1E1 186 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 SYT5O00445 386 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 TNFSF11O14788 317 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 SNNO75324 88 aaPredicted RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 IGKV1D-16P01601 117 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 NCF2P19878 526 aaPredicted RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 ARRB2P32121 409 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 HTR3AP46098 478 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 AGFG1P52594 562 aaKnown RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 ZNF136P52737 540 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 CLDN18P56856 261 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 NCALDP61601 193 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 UFM1P61960 85 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 FOXF1Q12946 379 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 RNPS1Q15287 305 aaKnown RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 ZSWIM7Q19AV6 140 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 DCST1Q5T197 706 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 PDZK1Q5T2W1 519 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 POMZP3Q6PJE2 187 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 CDH24Q86UP0 819 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 KRT73Q86Y46 540 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 LURAP1LQ8IV03 231 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 CMIPQ8IY22 773 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 ZNF440Q8IYI8 595 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 METTL25Q8N6Q8 603 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 C9orf106Q8NAJ2 232 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 CHDHQ8NE62 594 aaPredicted RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 OR2V1Q8NHB1 315 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 FAM110BQ8TC76 370 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 SLC25A43Q8WUT9 341 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms