RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 BHLHB9Q6PI77 547 aa17■□□□□ 0.31
VARS-220ENST00000461874 FAM214BQ7L5A3 538 aa17■□□□□ 0.31
VARS-220ENST00000461874 ZNF527Q8NB42 609 aa17■□□□□ 0.31
VARS-220ENST00000461874 OR5AK3PQ8NH89 298 aa17■□□□□ 0.31
VARS-220ENST00000461874 PHOSPHO1Q8TCT1 267 aa17■□□□□ 0.31
VARS-220ENST00000461874 PPP1R36Q96LQ0 422 aa17■□□□□ 0.31
VARS-220ENST00000461874 WFIKKN1Q96NZ8 548 aa17■□□□□ 0.31
VARS-220ENST00000461874 SORT1Q99523 831 aa17■□□□□ 0.31
VARS-220ENST00000461874 PAQR5Q9NXK6 330 aaPredicted RBP17■□□□□ 0.31
VARS-220ENST00000461874 ZFHX3Q15911 3703 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 NPIPA5A0A0B4J1W7 369 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 NPIPA7E9PJI5 369 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 NPIPB9F8W1W9 429 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 ATE1O95260 518 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 RAF1P04049 648 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 NPIPA8P0DM63 369 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 POU2F1P14859 743 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 ME2P23368 584 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 UGT2B10P36537 528 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 EIF1P41567 113 aaKnown RBP16.99■□□□□ 0.31
VARS-220ENST00000461874 SLC1A6P48664 564 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 RPL14P50914 215 aaKnown RBP16.99■□□□□ 0.31
VARS-220ENST00000461874 ATP12AP54707 1039 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 RIPPLY3P57055 190 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.99■□□□□ 0.31
VARS-220ENST00000461874 ESPNLQ6ZVH7 1005 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 ZNF610Q8N9Z0 462 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 CHDHQ8NE62 594 aaPredicted RBP16.99■□□□□ 0.31
VARS-220ENST00000461874 OR2V1Q8NHB1 315 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 ALPK1Q96QP1 1244 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 OR7D2Q96RA2 312 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 PRRG4Q9BZD6 226 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 CENPHQ9H3R5 247 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 HAO1Q9UJM8 370 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 PROCRQ9UNN8 238 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 ACTL7BQ9Y614 415 aa16.99■□□□□ 0.31
VARS-220ENST00000461874 A0A0J9YW62 118 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 A0A1W2PPR1 153 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 H3BNH8 94 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 RNASET2O00584 256 aaKnown RBP16.98■□□□□ 0.31
VARS-220ENST00000461874 OIP5O43482 229 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 CXCL13O43927 109 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 IL11P20809 199 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 BGNP21810 368 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 SOAT1P35610 550 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 RNF144AP50876 292 aaPredicted RBP16.98■□□□□ 0.31
VARS-220ENST00000461874 OR4F3Q6IEY1 312 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 PPP4R4Q6NUP7 873 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 CBLN3Q6UW01 205 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 C6orf120Q7Z4R8 191 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 CLECL1Q8IZS7 167 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 OR5D16Q8NGK9 328 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 GMPPAQ96IJ6 420 aaPredicted RBP16.98■□□□□ 0.31
VARS-220ENST00000461874 SDF2Q99470 211 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 TMUB1Q9BVT8 246 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 TMEM185BQ9H7F4 350 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 KCNK9Q9NPC2 374 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 KLHL28Q9NXS3 571 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 MCTS1Q9ULC4 181 aaKnown RBP16.98■□□□□ 0.31
VARS-220ENST00000461874 ICAM5Q9UMF0 924 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 CARD8Q9Y2G2 431 aa16.98■□□□□ 0.31
VARS-220ENST00000461874 ACANP16112 2415 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 C16orf97H3BN30 126 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 TNFSF11O14788 317 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 SYNGR4O95473 234 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 CCKARP32238 428 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 KCNJ5P48544 419 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 P2RX1P51575 399 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 SUMO3P55854 103 aaPredicted RBP16.97■□□□□ 0.31
VARS-220ENST00000461874 RPS26P62854 115 aaKnown RBP16.97■□□□□ 0.31
VARS-220ENST00000461874 FOXF1Q12946 379 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 KEAP1Q14145 624 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 PDSS1Q5T2R2 415 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 HBMQ6B0K9 141 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 TGIF2LYQ8IUE0 185 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 KIRREL3Q8IZU9 778 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 LILRA2Q8N149 483 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 OR8J2Q8NGG1 315 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 OR6K3Q8NGY3 331 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 OSTF1Q92882 214 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 ZBTB9Q96C00 473 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 DPY30Q9C005 99 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 SERHL2Q9H4I8 314 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 PLSCR4Q9NRQ2 329 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 CLEC4AQ9UMR7 237 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 EMC9Q9Y3B6 208 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 DTNAQ9Y4J8 743 aa16.97■□□□□ 0.31
VARS-220ENST00000461874 ZNF469Q96JG9 3925 aaPredicted RBP16.97■□□□□ 0.31
VARS-220ENST00000461874 DUXAA6NLW8 204 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 GTPBP1O00178 669 aaKnown RBP16.96■□□□□ 0.31
VARS-220ENST00000461874 EFNA2O43921 213 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 SCN2BO60939 215 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 SS18L1O75177 396 aaPredicted RBP16.96■□□□□ 0.31
VARS-220ENST00000461874 NUDT14O95848 222 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 PLGP00747 810 aaPredicted RBP16.96■□□□□ 0.31
VARS-220ENST00000461874 TUBBP07437 444 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 CD99P14209 185 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 MATN1P21941 496 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 ELK4P28324 431 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 ADH6P28332 368 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms