RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 GPR68Q15743 365 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 PLPPR5Q32ZL2 321 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 PLXDC2Q6UX71 529 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF621Q6ZSS3 439 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 MIER2Q8N344 545 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 GTPBP8Q8N3Z3 284 aaPredicted RBP20.29■□□□□ 0.84
TRAF4-207ENST00000461195 SMPDL3BQ92485 455 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 RAB8BQ92930 207 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 LRRC46Q96FV0 321 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF350Q9GZX5 532 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 ACBD3Q9H3P7 528 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 POLR3GO15318 223 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-207ENST00000461195 FCMRO60667 390 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 SSTR2P30874 369 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 CDKN2CP42773 168 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 RNF144AP50876 292 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-207ENST00000461195 SUCLG1P53597 346 aaKnown RBP20.28■□□□□ 0.84
TRAF4-207ENST00000461195 SUMO3P55854 103 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-207ENST00000461195 CLDN20P56880 219 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 P4HA3Q7Z4N8 544 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 MED12LQ86YW9 2145 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 TCF7L2Q9NQB0 619 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 MKLN1Q9UL63 735 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 CARD8Q9Y2G2 431 aa20.28■□□□□ 0.84
TRAF4-207ENST00000461195 OTOGQ6ZRI0 2925 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 H0YC42 278 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 SYT5O00445 386 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 RFXANKO14593 260 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 TNFRSF21O75509 655 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 TGM6O95932 706 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 GSNP06396 782 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 GUSBP08236 651 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 IDH3AP50213 366 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 ANXA11P50995 505 aaKnown RBP20.27■□□□□ 0.84
TRAF4-207ENST00000461195 P2RX1P51575 399 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 POLR2JP52435 117 aaKnown RBP20.27■□□□□ 0.84
TRAF4-207ENST00000461195 AGFG1P52594 562 aaKnown RBP20.27■□□□□ 0.84
TRAF4-207ENST00000461195 TPD52P55327 224 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-207ENST00000461195 RPS3AP61247 264 aaKnown RBP20.27■□□□□ 0.84
TRAF4-207ENST00000461195 TXNL4AP83876 142 aaKnown RBP20.27■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF141Q15928 474 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 FBXL19-AS1Q494R0 122 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 PDZK1Q5T2W1 519 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 CBLN3Q6UW01 205 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 RNF130Q86XS8 419 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 CKAP2Q8WWK9 683 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 ROPN1LQ96C74 230 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 INTS12Q96CB8 462 aaKnown RBP20.27■□□□□ 0.84
TRAF4-207ENST00000461195 C14orf79Q96F83 325 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 RNF145Q96MT1 663 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 KLHDC3Q9BQ90 382 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 SFXN3Q9BWM7 321 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 SLC24A3Q9HC58 644 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 POLE3Q9NRF9 147 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 ICAM5Q9UMF0 924 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 WDR45Q9Y484 360 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 DCHS2Q6V1P9 2916 aa20.27■□□□□ 0.84
TRAF4-207ENST00000461195 SERINC4A6NH21 518 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 SLC22A20A6NK97 555 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 OIP5O43482 229 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 EIF4E2O60573 245 aaKnown RBP20.26■□□□□ 0.83
TRAF4-207ENST00000461195 NUDT14O95848 222 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 LINGO3P0C6S8 592 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 UBL4AP11441 157 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 EIF1P41567 113 aaKnown RBP20.26■□□□□ 0.83
TRAF4-207ENST00000461195 DLX5P56178 289 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 STX1BP61266 288 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 EEF1A1P68104 462 aaKnown RBP20.26■□□□□ 0.83
TRAF4-207ENST00000461195 FOXF2Q12947 444 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 EEF1A1P5Q5VTE0 462 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 MSANTD1Q6ZTZ1 278 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 OLIG3Q7RTU3 272 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 METTL25Q8N6Q8 603 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 OR9I1Q8NGQ6 314 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 RNASE6Q93091 150 aaKnown RBP20.26■□□□□ 0.83
TRAF4-207ENST00000461195 MAGEB18Q96M61 343 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 NPAS1Q99742 590 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 EBF4Q9BQW3 602 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 CCDC28BQ9BUN5 200 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 PINK1Q9BXM7 581 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 RMND5AQ9H871 391 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 KCNE5Q9UJ90 142 aa20.26■□□□□ 0.83
TRAF4-207ENST00000461195 ANKRD17O75179 2603 aaKnown RBP20.25■□□□□ 0.83
TRAF4-207ENST00000461195 FAM234BA2RU67 622 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 EEF1E1-BLOC1S5C9J1V9 151 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 HMGN4O00479 90 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 ZNF264O43296 627 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 EEF1E1O43324 174 aaKnown RBP20.25■□□□□ 0.83
TRAF4-207ENST00000461195 KIAA0513O60268 411 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 UGT2B17O75795 530 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 KRT75O95678 551 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 C1QCP02747 245 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 PSMA4P25789 261 aaKnown RBP20.25■□□□□ 0.83
TRAF4-207ENST00000461195 UQCRC1P31930 480 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 AQP5P55064 265 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 RAC1P63000 192 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 FUT5Q11128 374 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 NDUFAF6Q330K2 333 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 OR2A2Q6IF42 318 aa20.25■□□□□ 0.83
TRAF4-207ENST00000461195 TYW3Q6IPR3 259 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms