RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 C6orf47O95873 294 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 KRT16P08779 473 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 CD8BP10966 210 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 LAMP1P11279 417 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 LCN1P31025 176 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 UGT2B10P36537 528 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 RNF144AP50876 292 aaPredicted RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 MLC1Q15049 377 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 LSM12Q3MHD2 195 aaKnown RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 UGT3A2Q3SY77 523 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 XKR7Q5GH72 579 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 PDSS1Q5T2R2 415 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 IL23RQ5VWK5 629 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 FAM214BQ7L5A3 538 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 GTPBP8Q8N3Z3 284 aaPredicted RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 ZNF610Q8N9Z0 462 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 ZNF527Q8NB42 609 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 OR56A1Q8NGH5 318 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 B4GALNT2Q8NHY0 566 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 ADAMTS15Q8TE58 950 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 OR5P2Q8WZ92 322 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 STACQ99469 402 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 PRPF18Q99633 342 aaKnown RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 ROPN1BQ9BZX4 212 aaPredicted RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 UBTD1Q9HAC8 227 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 ROPN1Q9HAT0 212 aaPredicted RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 SIRT3Q9NTG7 399 aaPredicted RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 PAQR5Q9NXK6 330 aaPredicted RBP14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 RAB21Q9UL25 225 aa14.13□□□□□ -0.15
CHCHD3-204ENST00000457942 NUP214P35658 2090 aaPredicted RBP14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 NPIPA5A0A0B4J1W7 369 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 NPIPA7E9PJI5 369 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 H3BNH8 94 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 ARHGEF9O43307 516 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 CTIFO43310 598 aaKnown RBP14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 CXCL13O43927 109 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 SMPD2O60906 423 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 LYPLA1O75608 230 aaPredicted RBP14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 NPIPA8P0DM63 369 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 CCKARP32238 428 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 SFTPDP35247 375 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 SLC6A8P48029 635 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 CCT3P49368 545 aaKnown RBP14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 OCRLQ01968 901 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 CD226Q15762 336 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 TMEM44Q2T9K0 475 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 PLPPR5Q32ZL2 321 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 C6orf136Q5SQH8 315 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 ANKRD34AQ69YU3 496 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 HBMQ6B0K9 141 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 KRTCAP2Q8N6L1 136 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 OR6K3Q8NGY3 331 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 OR2V1Q8NHB1 315 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 FAM110BQ8TC76 370 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 ACTRT2Q8TDY3 377 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 PERPQ96FX8 193 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 GMPPAQ96IJ6 420 aaPredicted RBP14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 C3orf30Q96M34 536 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 ACTRT3Q9BYD9 372 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 PIGUQ9H490 435 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 FANCFQ9NPI8 374 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 DUSP22Q9NRW4 184 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 ZDHHC2Q9UIJ5 367 aa14.12□□□□□ -0.15
CHCHD3-204ENST00000457942 A0A1W2PQD3 144 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 GTPBP1O00178 669 aaKnown RBP14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 BPGMP07738 259 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 PRPS1L1P21108 318 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 RAC1P63000 192 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 FOXF1Q12946 379 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 PGS1Q32NB8 556 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 DCST2Q5T1A1 773 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 CDC73Q6P1J9 531 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 ESPNLQ6ZVH7 1005 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 YTHDF3Q7Z739 585 aaKnown RBP14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 NUDCD3Q8IVD9 361 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 NATD1Q8N6N6 113 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 TMCO5AQ8N6Q1 288 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 OR5AK3PQ8NH89 298 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 REXO5Q96IC2 774 aaKnown RBP14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 PKNOX2Q96KN3 472 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 PPP1R36Q96LQ0 422 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 KLHL15Q96M94 604 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 NPAS1Q99742 590 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 CXorf36Q9H7Y0 433 aa14.11□□□□□ -0.15
CHCHD3-204ENST00000457942 WDR91A4D1P6 747 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 C7orf72A4D263 438 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 CGAP01215 116 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 CREB1P16220 341 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 CRYGSP22914 178 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 ARRB2P32121 409 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 EIF1P41567 113 aaKnown RBP14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 PCYT1AP49585 367 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 CCR4P51679 360 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 ZNF117Q03924 483 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 MAD2L1Q13257 205 aaPredicted RBP14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 PDCD2Q16342 344 aaPredicted RBP14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 KRT71Q3SY84 523 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 STK32CQ86UX6 486 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 MREGQ8N565 214 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms