RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SLC22A5O76082 557 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 TIMP1P01033 207 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 TCRBP04435 133 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 CD1AP06126 327 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 EIF4EP06730 217 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 TPOP07202 933 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 C8orf89P0DMQ9 161 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 CCL5P13501 91 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 CPMP14384 443 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 UGT2B7P16662 529 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF19P17023 458 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 C5AR1P21730 350 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 DNASE1P24855 282 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 MAPK3P27361 379 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 LCN1P31025 176 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OPRD1P41143 372 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 RBM34P42696 430 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 PDX1P52945 283 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 EPHA4P54764 986 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 P2RX3P56373 397 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 CAV3P56539 151 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 CTBP2P56545 445 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 RAB8AP61006 207 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 SRP54P61011 504 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ERVK-21P61565 698 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 SKP1P63208 163 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 RPS21P63220 83 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 POU6F2P78424 691 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 RPL6Q02878 288 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC3A1Q07837 685 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 STX4Q12846 297 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF155Q12901 538 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ILF3Q12906 894 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 DUSP8Q13202 625 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 CAMK2BQ13554 666 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 DOC2BQ14184 412 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 AGERQ15109 404 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 IRF4Q15306 451 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 P2RY14Q15391 338 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 FCN2Q15485 313 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 TCEA2Q15560 299 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR1Q1Q15612 314 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 GPR68Q15743 365 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 CEBPEQ15744 281 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 RPE65Q16518 533 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 DEFB115Q30KQ5 88 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 UAP1L1Q3KQV9 507 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ACSM3Q53FZ2 586 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 PLA1AQ53H76 456 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 TCEAL5Q5H9L2 206 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 UBE2NLQ5JXB2 153 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC35D3Q5M8T2 416 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 EOGTQ5NDL2 527 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 DCST2Q5T1A1 773 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 BCL2L15Q5TBC7 163 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZBTB37Q5TC79 503 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 GARNL3Q5VVW2 1013 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 METTL11BQ5VVY1 283 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 FAM205BPQ63HN1 556 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF776Q68DI1 518 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 C18orf63Q68DL7 685 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 SIGIRRQ6IA17 410 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 HEPHL1Q6MZM0 1159 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 RPL22L1Q6P5R6 122 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF613Q6PF04 617 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 VITQ6UXI7 678 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 LRRN1Q6UXK5 716 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF836Q6ZNA1 936 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 FRRS1Q6ZNA5 592 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 RTL4Q6ZR62 310 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 BTN2A1Q7KYR7 527 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 LINGO2Q7L985 606 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OVCH1Q7RTY7 1134 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF550Q7Z398 422 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 WDR53Q7Z5U6 358 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 GRASPQ7Z6J2 395 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 UBE2Q1Q7Z7E8 422 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 HMGN2P46Q86SG4 172 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 AMIGO1Q86WK6 493 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OOSP2Q86WS3 158 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 NKAIN4Q8IVV8 208 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ETFBKMTQ8IXQ9 262 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 GPR135Q8IZ08 494 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ELMOD2Q8IZ81 293 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR8H3Q8N146 312 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 SYS1Q8N2H4 156 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 PIAS4Q8N2W9 510 aaPredicted RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 C9orf62Q8N4C0 152 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 SIRT6Q8N6T7 355 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 TMEM99Q8N816 258 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 MRPL43Q8N983 215 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 LMNTD1Q8N9Z9 388 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 FAM98AQ8NCA5 519 aaKnown RBP3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF485Q8NCK3 441 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 BBS1Q8NFJ9 593 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR2L3Q8NG85 312 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR4M2Q8NGB6 313 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR4M1Q8NGD0 313 aa3.1□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR52E1Q8NGJ3 308 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms