RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 MANSC1Q9H8J5 431 aa19.09■□□□□ 0.65
HMGB3-205ENST00000455596 RNF122Q9H9V4 155 aa19.09■□□□□ 0.65
HMGB3-205ENST00000455596 RASSF1Q9NS23 344 aa19.09■□□□□ 0.65
HMGB3-205ENST00000455596 AIG1Q9NVV5 245 aa19.09■□□□□ 0.65
HMGB3-205ENST00000455596 PAQR5Q9NXK6 330 aaPredicted RBP19.09■□□□□ 0.65
HMGB3-205ENST00000455596 MARCOQ9UEW3 520 aaPredicted RBP19.09■□□□□ 0.65
HMGB3-205ENST00000455596 DTNAQ9Y4J8 743 aa19.09■□□□□ 0.65
HMGB3-205ENST00000455596 FAM221AA4D161 298 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 NPIPB9F8W1W9 429 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 SLCO1B7G3V0H7 640 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 GTPBP1O00178 669 aaKnown RBP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 MSTNO14793 375 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 SMNDC1O75940 238 aaKnown RBP eCLIP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 NUDT14O95848 222 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 ALDOCP09972 364 aaKnown RBP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 KITP10721 976 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 EPXP11678 715 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 ME2P23368 584 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 PSMA4P25789 261 aaKnown RBP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 EIF1AXP47813 144 aaKnown RBP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 SUMO3P55854 103 aaPredicted RBP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 RAC1P63000 192 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 CASP8Q14790 479 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 ARHGAP11BQ3KRB8 267 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 FAM174BQ3ZCQ3 159 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 VWA1Q6PCB0 445 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 LINC01560Q8TB33 94 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 MIPOL1Q8TD10 442 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 STARD4Q96DR4 205 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 KLHDC3Q9BQ90 382 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 CLEC4MQ9H2X3 399 aaPredicted RBP19.08■□□□□ 0.64
HMGB3-205ENST00000455596 OR51I1Q9H343 314 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 EXD2Q9NVH0 621 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 CARD8Q9Y2G2 431 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 CSMD2Q7Z408 3487 aa19.08■□□□□ 0.64
HMGB3-205ENST00000455596 GOLGA8QA0A0J9YX86 632 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 GOLGA8OA6NCC3 632 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 GOLGA8NF8WBI6 632 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 AGR2O95994 175 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 LINGO3P0C6S8 592 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 EPHA3P29320 983 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 CPOXP36551 454 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 EIF1P41567 113 aaKnown RBP19.07■□□□□ 0.64
HMGB3-205ENST00000455596 KIR2DL2P43627 348 aaPredicted RBP19.07■□□□□ 0.64
HMGB3-205ENST00000455596 RNF144AP50876 292 aaPredicted RBP19.07■□□□□ 0.64
HMGB3-205ENST00000455596 NME5P56597 212 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 SIRPAP78324 504 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 FGFBP1Q14512 234 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 DAZAP2Q15038 168 aaPredicted RBP19.07■□□□□ 0.64
HMGB3-205ENST00000455596 GPR68Q15743 365 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 PPP4R4Q6NUP7 873 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 CBLN3Q6UW01 205 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 ESPNLQ6ZVH7 1005 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 C16orf62Q7Z3J2 963 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 POC1BQ8TC44 478 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 PRRG4Q9BZD6 226 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 NMUR2Q9GZQ4 415 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 WDR55Q9H6Y2 383 aaPredicted RBP19.07■□□□□ 0.64
HMGB3-205ENST00000455596 ICAM5Q9UMF0 924 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 CSMD1Q96PZ7 3565 aa19.07■□□□□ 0.64
HMGB3-205ENST00000455596 STX11O75558 287 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 CASP9P55211 416 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 UFM1P61960 85 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 FOXF1Q12946 379 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 CTU2Q2VPK5 515 aaKnown RBP19.06■□□□□ 0.64
HMGB3-205ENST00000455596 PDSS1Q5T2R2 415 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 PDZK1Q5T2W1 519 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 ATAD3BQ5T9A4 648 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 SAXO2Q658L1 398 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 BTLAQ7Z6A9 289 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 OR10D3Q8NH80 312 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 ADGRG7Q96K78 797 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 TEX37Q96LM6 180 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 BTNL2Q9UIR0 455 aa19.06■□□□□ 0.64
HMGB3-205ENST00000455596 MCTS1Q9ULC4 181 aaKnown RBP19.06■□□□□ 0.64
HMGB3-205ENST00000455596 ANKHD1Q8IWZ3 2542 aaKnown RBP19.05■□□□□ 0.64
HMGB3-205ENST00000455596 TNFSF11O14788 317 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 ZNF264O43296 627 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 OIP5O43482 229 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 EIF4E2O60573 245 aaKnown RBP19.05■□□□□ 0.64
HMGB3-205ENST00000455596 AQP8O94778 261 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 GOSR1O95249 250 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 OPN1LWP04000 364 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 OR12D1P0DN82 309 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 UBL4AP11441 157 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 ELK4P28324 431 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 ADH6P28332 368 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 DNAJA1P31689 397 aaKnown RBP19.05■□□□□ 0.64
HMGB3-205ENST00000455596 CHI3L1P36222 383 aaPredicted RBP19.05■□□□□ 0.64
HMGB3-205ENST00000455596 ZNF141Q15928 474 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 NDUFAF6Q330K2 333 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 FBXW10Q5XX13 1052 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 HEPHL1Q6MZM0 1159 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 LILRA2Q8N149 483 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 TMCO5AQ8N6Q1 288 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 OR2V1Q8NHB1 315 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 NRGNQ92686 78 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 CCDC115Q96NT0 180 aa19.05■□□□□ 0.64
HMGB3-205ENST00000455596 DACH2Q96NX9 599 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms