RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 C9orf135Q5VTT2 229 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CDC73Q6P1J9 531 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 METTL2BQ6P1Q9 378 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 DNM1P46Q6ZS02 220 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FCRLAQ7L513 359 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 BHLHA15Q7RTS1 189 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HMGN2P46Q86SG4 172 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 STK32CQ86UX6 486 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HIPK1Q86Z02 1210 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 WDR75Q8IWA0 830 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LILRA2Q8N149 483 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PIAS4Q8N2W9 510 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 COX18Q8N8Q8 333 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR2T11Q8NH01 316 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RFWD2Q8NHY2 731 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OSTF1Q92882 214 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CDS1Q92903 461 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C3orf49Q96BT1 292 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ERP27Q96DN0 273 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ELP4Q96EB1 424 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GIMAP5Q96F15 307 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MS4A4EQ96PG1 132 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TSSK3Q96PN8 268 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TRAF4Q9BUZ4 470 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C19orf24Q9BVV8 132 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C1QTNF3Q9BXJ4 246 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 QRSL1Q9H0R6 528 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ALG2Q9H553 416 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MYNNQ9NPC7 610 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SDHAF3Q9NRP4 125 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PLSCR4Q9NRQ2 329 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RYDENQ9NUL5 291 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NMRK1Q9NWW6 199 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ING1Q9UK53 422 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 EMCNQ9ULC0 261 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TRAF6Q9Y4K3 522 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NUP214P35658 2090 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MEGF8Q7Z7M0 2845 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SLC35F4A4IF30 521 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 BCAS1O75363 584 aaPredicted RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CRCPO75575 148 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ENO1P06733 434 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FESP07332 822 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LINGO3P0C6S8 592 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FAM157CP0CG43 387 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SDC1P18827 310 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IGHV1-2P23083 117 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ADH6P28332 368 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CASQ1P31415 396 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PCYT1AP49585 367 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CLK3P49761 638 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FOXG1P55316 489 aaPredicted RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RPL38P63173 70 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SLC25A3Q00325 362 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CHRNEQ04844 493 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C17orf67Q0P5P2 114 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SLC29A2Q14542 456 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LASP1Q14847 261 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 P2RY6Q15077 328 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PPA1Q15181 289 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TMEM176BQ3YBM2 270 aaPredicted RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GLE1Q53GS7 698 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TMEM201Q5SNT2 666 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NOXRED1Q6NXP6 359 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GALNT18Q6P9A2 607 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PODNL1Q6PEZ8 512 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 BEND4Q6ZU67 534 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ESPNLQ6ZVH7 1005 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SAMD14Q8IZD0 417 aaPredicted RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CLEC4FQ8N1N0 589 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 STEAP2Q8NFT2 490 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR52N5Q8NH56 324 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR5AK3PQ8NH89 298 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 B4GALNT2Q8NHY0 566 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FBXO27Q8NI29 283 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PIWIL2Q8TC59 973 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PHOSPHO1Q8TCT1 267 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 AGR3Q8TD06 166 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZFP90Q8TF47 636 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IFT81Q8WYA0 676 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TMEM158Q8WZ71 300 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZBTB8AQ96BR9 441 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 DTNBP1Q96EV8 351 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TRMT61AQ96FX7 289 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FMO2Q99518 471 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C1QTNF6Q9BXI9 259 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ESRP2Q9H6T0 727 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SIRT3Q9NTG7 399 aaPredicted RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CISD1Q9NZ45 108 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TBK1Q9UHD2 729 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 BAIAP2L1Q9UHR4 511 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TMCO1Q9UM00 188 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 B3GALT5Q9Y2C3 310 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CARD8Q9Y2G2 431 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GPR52Q9Y2T5 361 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KCNE3Q9Y6H6 103 aa5.3□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PRKDCP78527 4128 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 A0A087WZY1 265 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C7orf72A4D263 438 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms