RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 KCTD14Q9BQ13 255 aaPredicted RBP21.89■■□□□ 1.09
CPSF4-207ENST00000451876 C1orf21Q9H246 121 aa21.89■■□□□ 1.09
CPSF4-207ENST00000451876 ZDHHC11Q9H8X9 412 aa21.89■■□□□ 1.09
CPSF4-207ENST00000451876 RLIMQ9NVW2 624 aa21.89■■□□□ 1.09
CPSF4-207ENST00000451876 B4GALT7Q9UBV7 327 aa21.89■■□□□ 1.09
CPSF4-207ENST00000451876 ZNF264O43296 627 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 CBR3O75828 277 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 THBS1P07996 1170 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 DMTNQ08495 405 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 EIF3MQ7L2H7 374 aaKnown RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 SLC30A8Q8IWU4 369 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 OR4K17Q8NGC6 315 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 SLX1AQ9BQ83 275 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 ICAM5Q9UMF0 924 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 LIPGQ9Y5X9 500 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 DNAJC13O75165 2243 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 EIF4E1BA6NMX2 242 aaKnown RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 NPIPA5E9PKD4 350 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 GTPBP1O00178 669 aaKnown RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 TCN1P20061 433 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 TDGF1P3P51864 188 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 EEF1A1P68104 462 aaKnown RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 CEACAM7Q14002 265 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 LIN52Q52LA3 116 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 ZNF311Q5JNZ3 666 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 INTS11Q5TA45 600 aaKnown RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 COMTD1Q86VU5 262 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 KRT73Q86Y46 540 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 B4GALNT2Q8NHY0 566 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 CNOT9Q92600 299 aaKnown RBP21.88■■□□□ 1.09
CPSF4-207ENST00000451876 ZNF607Q96SK3 696 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 DEFB127Q9H1M4 99 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 CD300AQ9UGN4 299 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 NPIPA1Q9UND3 350 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 SLC35A3Q9Y2D2 325 aa21.88■■□□□ 1.09
CPSF4-207ENST00000451876 MED12Q93074 2177 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 CDHR4A6H8M9 788 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 M0QX08 132 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 TPST1O60507 370 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 ADAM11O75078 769 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 CYP7B1O75881 506 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 MFN2O95140 757 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 LARS2Q15031 903 aaKnown RBP21.87■■□□□ 1.09
CPSF4-207ENST00000451876 TOMM20Q15388 145 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 GLIPR1L2Q4G1C9 344 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 CCDC80Q76M96 950 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 PRICKLE2Q7Z3G6 844 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 CLIP4Q8N3C7 705 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 TMCO5AQ8N6Q1 288 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 TAMM41Q96BW9 452 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 AGPAT4Q9NRZ5 378 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 DNAJB12Q9NXW2 375 aaKnown RBP21.87■■□□□ 1.09
CPSF4-207ENST00000451876 SEC14L3Q9UDX4 400 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 EGFL7Q9UHF1 273 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 IFT52Q9Y366 437 aa21.87■■□□□ 1.09
CPSF4-207ENST00000451876 DNAJA2O60884 412 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 EPPINO95925 133 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 MSX2P35548 267 aaPredicted RBP21.86■■□□□ 1.09
CPSF4-207ENST00000451876 P2RX1P51575 399 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 SAMD4BQ5PRF9 694 aaKnown RBP21.86■■□□□ 1.09
CPSF4-207ENST00000451876 RNF220Q5VTB9 566 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 ARSKQ6UWY0 536 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 ARMC8Q8IUR7 673 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 CMIPQ8IY22 773 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 SMYD1Q8NB12 490 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 FAM83FQ8NEG4 500 aaPredicted RBP21.86■■□□□ 1.09
CPSF4-207ENST00000451876 C1GALT1C1Q96EU7 318 aa21.86■■□□□ 1.09
CPSF4-207ENST00000451876 EIF4E2O60573 245 aaKnown RBP21.85■■□□□ 1.09
CPSF4-207ENST00000451876 SERPINB7O75635 380 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 TRAPPC6AO75865 159 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 PDE9AO76083 593 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 HPNP05981 417 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 HSD17B1P14061 328 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 TCEA1P23193 301 aaKnown RBP21.85■■□□□ 1.09
CPSF4-207ENST00000451876 CCR4P51679 360 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 PATL1Q86TB9 770 aaKnown RBP21.85■■□□□ 1.09
CPSF4-207ENST00000451876 FIG4Q92562 907 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 ZNF524Q96C55 264 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 SPATA5L1Q9BVQ7 753 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 LAT2Q9GZY6 243 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 SLC6A15Q9H2J7 730 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 CACYBPQ9HB71 228 aaKnown RBP21.85■■□□□ 1.09
CPSF4-207ENST00000451876 QPCTLQ9NXS2 382 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 DKKL1Q9UK85 242 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 ZNF232Q9UNY5 417 aa21.85■■□□□ 1.09
CPSF4-207ENST00000451876 CDC40O60508 579 aaKnown RBP eCLIP21.84■■□□□ 1.09
CPSF4-207ENST00000451876 NCK1P16333 377 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 ENDOUP21128 410 aaKnown RBP21.84■■□□□ 1.09
CPSF4-207ENST00000451876 DPP4P27487 766 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 MSX1P28360 303 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 HTR1EP28566 365 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 PRKAR1BP31321 381 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 DSCR4P56555 118 aaPredicted RBP21.84■■□□□ 1.09
CPSF4-207ENST00000451876 FOXK1P85037 733 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 HSF1Q00613 529 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 TLE1Q04724 770 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 DUSP7Q16829 419 aa21.84■■□□□ 1.09
CPSF4-207ENST00000451876 LRRC23Q53EV4 343 aaPredicted RBP21.84■■□□□ 1.09
CPSF4-207ENST00000451876 EIPR1Q53HC9 387 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms