RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 NTMQ9P121 344 aa14.87□□□□□ -0.03
RAB11FIP3-204ENST00000449879 EMC9Q9Y3B6 208 aa14.87□□□□□ -0.03
RAB11FIP3-204ENST00000449879 NUP214P35658 2090 aaPredicted RBP14.87□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PRR14LQ5THK1 2151 aa14.87□□□□□ -0.03
RAB11FIP3-204ENST00000449879 VPS13CQ709C8 3753 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 A0A087WZY1 265 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 HMGB1P1B2RPK0 211 aaPredicted RBP14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CXCL13O43927 109 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 TBX19O60806 448 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ALOX5P09917 674 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 FPR1P21462 350 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 FRKP42685 505 aaPredicted RBP14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ASMTP46597 345 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CTBP2P56545 445 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PDE7AQ13946 482 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 C6orf136Q5SQH8 315 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CPTPQ5TA50 214 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 MFSD12Q6NUT3 480 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CLEC9AQ6UXN8 241 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 FNDC5Q8NAU1 212 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 FAM110BQ8TC76 370 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 JADE3Q92613 823 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CHMP6Q96FZ7 201 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CCL19Q99731 98 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PIP5K1AQ99755 562 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 TMEM185BQ9H7F4 350 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 HHATLQ9HCP6 504 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PLSCR4Q9NRQ2 329 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 UBQLN4Q9NRR5 601 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ACSS1Q9NUB1 689 aaPredicted RBP14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 THAP1Q9NVV9 213 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 GIMAP2Q9UG22 337 aa14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 MCTS1Q9ULC4 181 aaKnown RBP14.86□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ABCA2Q9BZC7 2435 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 A0A1W2PRB8 838 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 SNNO75324 88 aaPredicted RBP14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 SYNGR4O95473 234 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 NGFRP08138 427 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 BCKDHAP12694 445 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ZNF17P17021 662 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ZNF41P51814 821 aaPredicted RBP14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 RAC1P63000 192 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 MAD2L1Q13257 205 aaPredicted RBP14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CCNJQ5T5M9 372 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 LRRC75A-AS1Q8N1F1 130 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 GTPBP8Q8N3Z3 284 aaPredicted RBP14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 COX18Q8N8Q8 333 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 OR6K3Q8NGY3 331 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ZBTB8AQ96BR9 441 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 GMPPAQ96IJ6 420 aaPredicted RBP14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 MARK4Q96L34 752 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 RNF145Q96MT1 663 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 KLHDC3Q9BQ90 382 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 C1orf50Q9BV19 199 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 MANSC1Q9H8J5 431 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 MED17Q9NVC6 651 aa14.85□□□□□ -0.03
RAB11FIP3-204ENST00000449879 USF3Q68DE3 2245 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 SCDO00767 359 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 TNFSF11O14788 317 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ADAMDEC1O15204 470 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 DDX5P17844 614 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ME2P23368 584 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PSMA4P25789 261 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 HPCAL1P37235 193 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PRIM2P49643 509 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 SMU1Q2TAY7 513 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CTU2Q2VPK5 515 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PLPPR5Q32ZL2 321 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ZCCHC12Q6PEW1 402 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 R3HCC1LQ7Z5L2 792 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 OR2V1Q8NHB1 315 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ACTRT2Q8TDY3 377 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 OSTF1Q92882 214 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 MTERF3Q96E29 417 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 FAM120BQ96EK7 910 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PERPQ96FX8 193 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ADGRG7Q96K78 797 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PPP1R36Q96LQ0 422 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 ZCCHC3Q9NUD5 404 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 PAQR5Q9NXK6 330 aaPredicted RBP14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 SNX8Q9Y5X2 465 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 CSPG4Q6UVK1 2322 aa14.84□□□□□ -0.03
RAB11FIP3-204ENST00000449879 A0A0J9YW62 118 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 KLF11O14901 512 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 SS18L1O75177 396 aaPredicted RBP14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 SASH3O75995 380 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 HMGN2P05204 90 aaKnown RBP14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 THBDP07204 575 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 IL11P20809 199 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 LOXP28300 417 aaPredicted RBP14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 RPL3P39023 403 aaKnown RBP14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 POU6F2P78424 691 aaPredicted RBP14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 CD226Q15762 336 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 IL23RQ5VWK5 629 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 HBMQ6B0K9 141 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 STAC2Q6ZMT1 411 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 ESPNLQ6ZVH7 1005 aa14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 YTHDF3Q7Z739 585 aaKnown RBP14.83□□□□□ -0.04
RAB11FIP3-204ENST00000449879 MISPQ8IVT2 679 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms