RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 BSPRYQ5W0U4 402 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ABLIM2Q6H8Q1 611 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARMC6Q6NXE6 501 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HAGHLQ6PII5 290 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HSDL2Q6YN16 418 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CERS6Q6ZMG9 384 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMPRSS11AQ6ZMR5 421 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZCCHC23Q6ZST2 131 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 RASSF6Q6ZTQ3 369 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MOB3CQ70IA8 216 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TECPR1Q7Z6L1 1165 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM17Q86X19 198 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CCDC71Q8IV32 467 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 DNAJC10Q8IXB1 793 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GCNT2Q8N0V5 402 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SVBPQ8N300 66 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CLDN22Q8N7P3 220 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF383Q8NA42 475 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 PNLDC1Q8NA58 520 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SETD9Q8NE22 299 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 C17orf47Q8NEP4 570 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR5K1Q8NHB7 308 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SPPL2BQ8TCT7 592 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR151Q8TDV0 419 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TCTEX1D2Q8WW35 142 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACOT11Q8WXI4 607 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAFIPQ8WZ33 124 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MR1Q95460 341 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLAMF9Q96A28 289 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ISG20Q96AZ6 181 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZBED6CLQ96FA7 236 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CMTM7Q96FZ5 175 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 P2RY11Q96G91 374 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 BSCL2Q96G97 398 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SENP5Q96HI0 755 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 LRR1Q96L50 414 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADAD1Q96M93 576 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 COQ10AQ96MF6 247 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CCDC115Q96NT0 180 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 WFIKKN1Q96NZ8 548 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MS4A4EQ96PG1 132 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ERMAPQ96PL5 475 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 KLHL5Q96PQ7 755 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TXN2Q99757 166 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF2Q9BSG1 426 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRRG3Q9BZD7 231 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GLIS2Q9BZE0 524 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CCDC90BQ9GZT6 254 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ABHD16BQ9H3Z7 469 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHODLQ9H9P2 273 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 FKRPQ9H9S5 495 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GALNT9Q9HCQ5 603 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADAP2Q9NPF8 381 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 FSCN3Q9NQT6 498 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SPHK2Q9NRA0 654 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADARB2Q9NS39 739 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNF146Q9NTX7 359 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 NLE1Q9NVX2 485 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 DMAC2Q9NW81 257 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 PARPBPQ9NWS1 579 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 RBAKQ9NYW8 714 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 NLGN3Q9NZ94 848 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 VAPAQ9P0L0 249 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GCNT4Q9P109 453 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 NTMQ9P121 344 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HCN3Q9P1Z3 774 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 RCC2Q9P258 522 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC9A2Q9UBY0 812 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 EIF2B4Q9UI10 523 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 FBXL3Q9UKT7 428 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBX20Q9UMR3 447 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 PPIEQ9UNP9 301 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MOKQ9UQ07 419 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 COL14A1Q05707 1796 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 STRCQ7RTU9 1775 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 BRCA1P38398 1863 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MEGF6O75095 1541 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 A0A087WUJ7 227 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CCDC195A0A1B0GUA6 201 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 A0A1B0GW55 424 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2M5A3KFT3 312 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM149AA5PLN7 773 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 METTL21EPA6NDL7 271 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PGPEP1LA6NFU8 196 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 URADA6NGE7 173 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 A6NIZ1 184 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DRGXA6NNA5 263 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2AT4A6NND4 320 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM238C9JI98 176 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 INMT-MINDY4F8WBC2 141 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 AP4M1O00189 453 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 LGALS8O00214 317 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRRG2O14669 202 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 TP53I11O14683 189 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 MRASO14807 208 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 MID1O15344 667 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 OGG1O15527 345 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 LYRM1O43325 122 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 KCNAB3O43448 404 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms