RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NFYAP23511 347 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-204ENST00000449510 GZMMP51124 257 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 CAP1Q01518 475 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 KCNC3Q14003 757 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF169Q14929 603 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.61□□□□□ -0.55
UBE3B-204ENST00000449510 COL28A1Q2UY09 1125 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 MINDY4Q4G0A6 757 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 C3orf38Q5JPI3 329 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 SFRP5Q5T4F7 317 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 INO80EQ8NBZ0 244 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-204ENST00000449510 OR6M1Q8NGM8 313 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF563Q8TA94 476 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF689Q96CS4 500 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-204ENST00000449510 ABHD1Q96SE0 405 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 AIFM2Q9BRQ8 373 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 FN3KQ9H479 309 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 KLK11Q9UBX7 282 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 SCP2D1Q9UJQ7 156 aa11.61□□□□□ -0.55
UBE3B-204ENST00000449510 FFAR1O14842 300 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 SLC16A5O15375 505 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 RLN2P04090 185 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 TRAPPC2P0DI81 140 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 TRAPPC2BP0DI82 140 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 RD3LP0DJH9 198 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 NTHL1P78549 312 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 MC2RQ01718 297 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 DSC1Q08554 894 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 KLHL26Q53HC5 615 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 SMPDL3BQ92485 455 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 OR2M2Q96R28 347 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 FTSJ1Q9UET6 329 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 MANSC4A6NHS7 340 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 PEX14O75381 377 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 SERPINA3P01011 423 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 CPEP16870 476 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 PSMB1P20618 241 aaKnown RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 GABRA3P34903 492 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 EIF1AXP47813 144 aaKnown RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 SLC6A12P48065 614 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 SNRPGP62308 76 aaKnown RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 E2F1Q01094 437 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 CRMP1Q14194 572 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 ZNHIT3Q15649 155 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 PGGHGQ32M88 737 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 SLC22A10Q63ZE4 541 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 VASNQ6EMK4 673 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 OR5M10Q6IEU7 315 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 CCDC36Q8IYA8 594 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 POMGNT2Q8NAT1 580 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 OR14C36Q8NHC7 312 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 HCAR2Q8TDS4 363 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 CNOT9Q92600 299 aaKnown RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 FBXW5Q969U6 566 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 ZC3H10Q96K80 434 aaKnown RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 KLF16Q9BXK1 252 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-204ENST00000449510 CHST8Q9H2A9 424 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 DEC1Q9P2X7 70 aa11.6□□□□□ -0.55
UBE3B-204ENST00000449510 TRDV1A0A1B0GX56 115 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 TVP23AA6NH52 213 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 PLPP1O14494 284 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CDK2AP1O14519 115 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 PCSK2P16519 638 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 TEAD1P28347 426 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 MMP12P39900 470 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ERVK-21P61565 698 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 TEAD2Q15562 447 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 OOSP2Q86WS3 158 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 DNAAF1Q8NEP3 725 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 GPR32P1Q8NGA4 272 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 OR6N2Q8NGY6 317 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 PRRC1Q96M27 445 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ATF6BQ99941 703 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 WFDC6Q9BQY6 131 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ATG5Q9H1Y0 275 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CENPMQ9NSP4 180 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 SPATA6Q9NWH7 488 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CALML5Q9NZT1 146 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ATXN7L1Q9ULK2 861 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 HRH3Q9Y5N1 445 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 COL16A1Q07092 1604 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ARPC4-TTLL3A0A0A6YYG9 625 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ITGA10O75578 1167 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 MSL3P1P0C860 447 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 HOXD10P28358 340 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 RPS27P42677 84 aaKnown RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 RAD52P43351 418 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 TPMTP51580 245 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 GGTA1PQ4G0N0 100 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 HBMQ6B0K9 141 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ARMC6Q6NXE6 501 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 LIPIQ6XZB0 460 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 KRT77Q7Z794 578 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 DCUN1D3Q8IWE4 304 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 GJD3Q8N144 294 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 LINC00471Q8N535 108 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 KREMEN2Q8NCW0 462 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 SYNPRQ8TBG9 265 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms