RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CHMP6Q96FZ7 201 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 LURAP1Q96LR2 239 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 INPP5KQ9BT40 448 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF350Q9GZX5 532 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 OR51I1Q9H343 314 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 MCCC2Q9HCC0 563 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 SLC6A13Q9NSD5 602 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 KCNN3Q9UGI6 736 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 DTNAQ9Y4J8 743 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 HIVEP1P15822 2718 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 MTORP42345 2549 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 HRNRQ86YZ3 2850 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 CENPVL1A0A0U1RR11 272 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 FAM221AA4D161 298 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 CCDC154A6NI56 674 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 GMFGO60234 142 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 SLC22A3O75751 556 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 SASH3O75995 380 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 NTN1O95631 604 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 AK1P00568 194 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 OR12D1P0DN82 309 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 NID1P14543 1247 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 IDO1P14902 403 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 HPGDP15428 266 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF17P17021 662 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 IL11P20809 199 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 ATP6V1C1P21283 382 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 SOAT1P35610 550 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 CDKN2CP42773 168 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 MRPL19P49406 292 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 ASCL1P50553 236 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 MVDP53602 400 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 CASP9P55211 416 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 RAC1P63000 192 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 TLE4Q04727 773 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 GUSBP1Q15486 140 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 TOMM34Q15785 309 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 MAPK14Q16539 360 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 FLYWCH1Q4VC44 716 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 UBQLNLQ8IYU4 475 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 XAGE5Q8WWM1 108 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 RAB8BQ92930 207 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 ZBTB8AQ96BR9 441 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 STARD4Q96DR4 205 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 ARSGQ96EG1 525 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 SH3YL1Q96HL8 342 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 SLC35G5Q96KT7 338 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 OR52E6Q96RD3 313 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 SFXN3Q9BWM7 321 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 ZIM2Q9NZV7 527 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 VDAC3Q9Y277 283 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 CARD8Q9Y2G2 431 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF175Q9Y473 711 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 USH1CQ9Y6N9 552 aa12.66□□□□□ -0.38
RTFDC1-204ENST00000449062 A0A1W2PNV4 684 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 SERINC4A6NH21 518 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 HMGN4O00479 90 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 UBDO15205 165 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 EIF4E2O60573 245 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 STX11O75558 287 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 UGT2B17O75795 530 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 TGDSO95455 350 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 IL6P05231 212 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 CRHP06850 196 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 KIR2DL2P43627 348 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 RNF144AP50876 292 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 P2RX1P51575 399 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 EEFSECP57772 596 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 SNTB1Q13884 538 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 MAPK11Q15759 364 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 GSTA3Q16772 222 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 SLC25A53Q5H9E4 307 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 NXNQ6DKJ4 435 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 TYW3Q6IPR3 259 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF527Q8NB42 609 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 PHOSPHO1Q8TCT1 267 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 SLC52A3Q9NQ40 469 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 FOXD3Q9UJU5 478 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 MKLN1Q9UL63 735 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 HEATR5AQ86XA9 2040 aa12.65□□□□□ -0.38
RTFDC1-204ENST00000449062 A0A0J9YW62 118 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 SLC22A20A6NK97 555 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 A8MXE2 369 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 HMGB1P1B2RPK0 211 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 H3BML4 177 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 AQP8O94778 261 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 AGR2O95994 175 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 CGAP01215 116 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 GSNP06396 782 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 ZCCHC18P0CG32 403 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 ADH6P28332 368 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 IDH3AP50213 366 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 SUMO3P55854 103 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 EEF1A1P68104 462 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 PLAURQ03405 335 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 LRRC74AQ0VAA2 488 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 GPR68Q15743 365 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 NDUFAF6Q330K2 333 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms