RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 RPL3P39023 403 aaKnown RBP11.85□□□□□ -0.51
HMGB3-204ENST00000448905 DMTNQ08495 405 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 ANKRD26P1Q6NSI1 321 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 CXXC5Q7LFL8 322 aaKnown RBP11.85□□□□□ -0.51
HMGB3-204ENST00000448905 NATD1Q8N6N6 113 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 PHOSPHO1Q8TCT1 267 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 CIDECQ96AQ7 238 aaPredicted RBP11.85□□□□□ -0.51
HMGB3-204ENST00000448905 MUCL1Q96DR8 90 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 REG4Q9BYZ8 158 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 ALG2Q9H553 416 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 DUSP22Q9NRW4 184 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 FAIMQ9NVQ4 179 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 OXSMQ9NWU1 459 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 GIN1Q9NXP7 522 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 MID2Q9UJV3 735 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 CCL27Q9Y4X3 112 aa11.85□□□□□ -0.51
HMGB3-204ENST00000448905 GPC6Q9Y625 555 aaPredicted RBP11.85□□□□□ -0.51
HMGB3-204ENST00000448905 A0A1W2PP18 115 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 TMEM114B3SHH9 223 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 RNF223E7ERA6 249 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 NPIPB8E9PQR5 432 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 AZIN1O14977 448 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 ADAP00813 363 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 KRT16P08779 473 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 LINGO3P0C6S8 592 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 SLC7A1P30825 629 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 CRHR1P34998 444 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 P2RX1P51575 399 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 ITGADQ13349 1161 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 MLC1Q15049 377 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 ZNF239Q16600 458 aaKnown RBP11.84□□□□□ -0.51
HMGB3-204ENST00000448905 DUSP5Q16690 384 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 TMEM176BQ3YBM2 270 aaPredicted RBP11.84□□□□□ -0.51
HMGB3-204ENST00000448905 NCMAPQ5T1S8 102 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 DNAJC14Q6Y2X3 702 aaPredicted RBP11.84□□□□□ -0.51
HMGB3-204ENST00000448905 FCRLAQ7L513 359 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 TUSC5Q8IXB3 177 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 GABRG1Q8N1C3 465 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 ADAMTS15Q8TE58 950 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 RNF128Q8TEB7 428 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 C16orf58Q96GQ5 468 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 TSSK3Q96PN8 268 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 STACQ99469 402 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 PRPF18Q99633 342 aaKnown RBP11.84□□□□□ -0.51
HMGB3-204ENST00000448905 TRMOQ9BU70 441 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 PIGUQ9H490 435 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 BARX1Q9HBU1 254 aaPredicted RBP11.84□□□□□ -0.51
HMGB3-204ENST00000448905 ZCCHC3Q9NUD5 404 aaKnown RBP11.84□□□□□ -0.51
HMGB3-204ENST00000448905 KLHL13Q9P2N7 655 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 BAIAP2L1Q9UHR4 511 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 FAF1Q9UNN5 650 aaPredicted RBP11.84□□□□□ -0.51
HMGB3-204ENST00000448905 LIPT1Q9Y234 373 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 ACTL7BQ9Y614 415 aa11.84□□□□□ -0.51
HMGB3-204ENST00000448905 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 A0A1W2PPM1 405 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 OVOL3O00110 214 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 KIF2AO00139 706 aaPredicted RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 COPEO14579 308 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 TLX2O43763 284 aaPredicted RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 PLIN3O60664 434 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 PROCP04070 461 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 HMGN2P05204 90 aaKnown RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 LINC00032P0C843 101 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 ACP2P11117 423 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 MAPK1P28482 360 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 FRKP42685 505 aaPredicted RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 SUMO3P55854 103 aaPredicted RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 TP53BP2Q13625 1128 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 LSM12Q3MHD2 195 aaKnown RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 SPDYE7PQ495Y7 208 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF672Q499Z4 452 aaPredicted RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 RFTN2Q52LD8 501 aaPredicted RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 KLHL26Q53HC5 615 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 LIPMQ5VYY2 423 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 CLEC6AQ6EIG7 209 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 PODNL1Q6PEZ8 512 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 Q6ZSR9 355 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 ATP6V1C2Q8NEY4 427 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 TOR1AIP2Q8NFQ8 470 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 FBXO27Q8NI29 283 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 FBXO30Q8TB52 745 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 RAB3IL1Q8TBN0 382 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 POC1BQ8TC44 478 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 ABHD3Q8WU67 409 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 GIMAP5Q96F15 307 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 RADILQ96JH8 1075 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 HS6ST2Q96MM7 605 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 REPIN1Q9BWE0 567 aaKnown RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 PPCSQ9HAB8 311 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 EML4Q9HC35 981 aaKnown RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 SERINC1Q9NRX5 453 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 ATAD3AQ9NVI7 634 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 KLHL9Q9P2J3 617 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 EMCNQ9ULC0 261 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 CARD8Q9Y2G2 431 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 EXPH5Q8NEV8 1989 aa11.83□□□□□ -0.52
HMGB3-204ENST00000448905 FN1P02751 2386 aaKnown RBP11.83□□□□□ -0.52
HMGB3-204ENST00000448905 GCM2O75603 506 aaPredicted RBP11.82□□□□□ -0.52
HMGB3-204ENST00000448905 SDC1P18827 310 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 HPCAL1P37235 193 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms