RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SLC38A1Q9H2H9 487 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 STOML1Q9UBI4 398 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 CAMK2AQ9UQM7 478 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 VDAC3Q9Y277 283 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 SLC35A3Q9Y2D2 325 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 MAST4O15021 2626 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 POLEQ07864 2286 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 B4DXG7 233 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 LINC01387J3KSC0 135 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 FBP2O00757 339 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 DBIP07108 87 aaKnown RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 HOXD4P09016 255 aaPredicted RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 TFPTP0C1Z6 253 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 UBTFL6P0CB48 400 aaPredicted RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 IL7RP16871 459 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 POU3F2P20265 443 aaPredicted RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 CHMP24386 653 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 ACVR2AP27037 513 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 PTGER4P35408 488 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 ADH7P40394 386 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 ZNF117Q03924 483 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 FGFBP1Q14512 234 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 TRMT5Q32P41 509 aaKnown RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 REP15Q6BDI9 236 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 ARSKQ6UWY0 536 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 METTL25Q8N6Q8 603 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 RP9Q8TA86 221 aaKnown RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 ZBTB8AQ96BR9 441 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 TMEM19Q96HH6 336 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 ANKRD27Q96NW4 1050 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 CPPED1Q9BRF8 314 aaPredicted RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 LAT2Q9GZY6 243 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 QRSL1Q9H0R6 528 aaKnown RBP12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 A4GALTQ9NPC4 353 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 MED17Q9NVC6 651 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 GID8Q9NWU2 228 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 GMEB1Q9Y692 573 aa12.71□□□□□ -0.37
GTF3C3-206ENST00000448539 DOPEY2Q9Y3R5 2298 aa12.71□□□□□ -0.38
GTF3C3-206ENST00000448539 A0A0G2JPF8 293 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 AGAP5A6NIR3 686 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 AHRRA9YTQ3 701 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 HNRNPCL2B2RXH8 293 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 HNRNPCL3B7ZW38 293 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 H0Y3Z8 333 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 HNRNPCL1O60812 293 aaKnown RBP12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 LDLRP01130 860 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 NPPAP01160 153 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 NUDT7P0C024 238 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 HNRNPCL4P0DMR1 293 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 BMP2P12643 396 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 GPX2P18283 190 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 SMSP52788 366 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 GFRA1P56159 465 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 KCNJ10P78508 379 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 SRYQ05066 204 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 CBFBQ13951 182 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 CAPRIN1Q14444 709 aaKnown RBP12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 MAPK14Q16539 360 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 NDUFAF6Q330K2 333 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 EMC4Q5J8M3 183 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 AP1ARQ63HQ0 302 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 CBLN3Q6UW01 205 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 RPTNQ6XPR3 784 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 CHMP1BQ7LBR1 199 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 HMGN2P46Q86SG4 172 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 CMIPQ8IY22 773 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 ULK2Q8IYT8 1036 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 OR52P1PQ8NH57 321 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 OR5W2Q8NH69 310 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 BBS10Q8TAM1 723 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 WDR60Q8WVS4 1066 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 MAL2Q969L2 176 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 ZG16BQ96DA0 208 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 CCDC120Q96HB5 630 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 PRDM14Q9GZV8 571 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 ARMC7Q9H6L4 198 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 RUBCNLQ9H714 662 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 ICAM5Q9UMF0 924 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF232Q9UNY5 417 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 ARL2BPQ9Y2Y0 163 aa12.7□□□□□ -0.38
GTF3C3-206ENST00000448539 NBPF19A0A087WUL8 3843 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF407Q9C0G0 2248 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 NCKAP5O14513 1909 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 OR2M5A3KFT3 312 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 H3BML4 177 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 OIP5O43482 229 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 ZG16O60844 167 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 PEPDP12955 493 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 GP1BBP13224 206 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 CPN1P15169 458 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF17P17021 662 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 PGCP20142 388 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 SLC6A2P23975 617 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms