RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NTNG2Q96CW9 530 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 POM121Q96HA1 1249 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 WDYHV1Q96HA8 205 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC35G5Q96KT7 338 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 ANKRD27Q96NW4 1050 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 MS4A4EQ96PG1 132 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 LIME1Q9H400 295 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 TPT1P8Q9HAU6 139 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 NTMQ9P121 344 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 USP22Q9UPT9 525 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 CAMK2AQ9UQM7 478 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 C15orf41Q9Y2V0 281 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 KCNE3Q9Y6H6 103 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 EBAG9O00559 213 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 NUDT7P0C024 238 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 ABCD3P28288 659 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 CPOXP36551 454 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 ZNF136P52737 540 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 PSME3P61289 254 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 PRR5P85299 388 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 SORDQ00796 357 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 SNTA1Q13424 505 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 BICRALQ6AI39 1079 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 NANOGP8Q6NSW7 305 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC30A6Q6NXT4 461 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 C8orf82Q6P1X6 216 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 NPSR1Q6W5P4 371 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 OLIG3Q7RTU3 272 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC16A11Q8NCK7 471 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 JADE3Q92613 823 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC7A6OSQ96CW6 309 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 NEURL3Q96EH8 262 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 UGT2B28Q9BY64 529 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 OR51I1Q9H343 314 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 PIF1Q9H611 641 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 NANOGQ9H9S0 305 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 CMTM6Q9NX76 183 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 CBLCQ9ULV8 474 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC6A5Q9Y345 797 aa12.48□□□□□ -0.41
PDLIM2-213ENST00000448520 NIPBLQ6KC79 2804 aaeCLIP12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 GXYLT2A0PJZ3 443 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 ACOX3O15254 700 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 COQ9O75208 318 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 PPM1BO75688 479 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 SLITRK5O94991 958 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 ETFAP13804 333 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 CPN1P15169 458 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 MATN1P21941 496 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC6A2P23975 617 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC7A2P52569 658 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 DCAF7P61962 342 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 EEF1A1P68104 462 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 DUSP5Q16690 384 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 EXOSC6Q5RKV6 272 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 EEF1A1P5Q5VTE0 462 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 FBXW10Q5XX13 1052 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 HACD2Q6Y1H2 254 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 GALNT10Q86SR1 603 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC15A3Q8IY34 581 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 TRIML2Q8N7C3 387 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 OR4N2Q8NGD1 307 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 PIK3R3Q92569 461 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC9A6Q92581 669 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 CDS1Q92903 461 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 ROPN1LQ96C74 230 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 DTNBP1Q96EV8 351 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC35A4Q96G79 324 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 LCORQ96JN0 433 aaPredicted RBP12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 VSTM2LQ96N03 204 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 OR7D2Q96RA2 312 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 TRIB1Q96RU8 372 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 NXF5Q9H1B4 397 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 GID8Q9NWU2 228 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 JKAMPQ9P055 326 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 EXPH5Q8NEV8 1989 aa12.47□□□□□ -0.41
PDLIM2-213ENST00000448520 NF1P21359 2839 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 KDM4EB2RXH2 506 aaPredicted RBP12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 NME4O00746 187 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 GNB5O14775 395 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 CBR3O75828 277 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 RAF1P04049 648 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 KRT16P08779 473 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 IFI6P09912 130 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 OR12D1P0DN82 309 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 CYP4B1P13584 511 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 GABRA3P34903 492 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 CRATP43155 626 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 PRIM2P49643 509 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 NCALDP61601 193 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 PSG6Q00889 435 aa12.46□□□□□ -0.41
PDLIM2-213ENST00000448520 RGNQ15493 299 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms