RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 KCTD12Q96CX2 325 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ELP4Q96EB1 424 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 C4orf36Q96KX1 117 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR14A2Q96R54 314 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RANGRFQ9HD47 186 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 MYEF2Q9P2K5 600 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 KLHL13Q9P2N7 655 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 MYH3P11055 1940 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 A6NIZ1 184 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 M0QZQ0 153 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 CACNG3O60359 315 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RAB40ALP0C0E4 278 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 BMP4P12644 408 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ARSBP15848 533 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 PSMB10P40306 273 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 SLC6A8P48029 635 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF136P52737 540 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RAP1BP61224 184 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 HNRNPKP61978 463 aaKnown RBP eCLIP7.32□□□□□ -1.242e-6■□□□□ 10.5
NEDD9-204ENST00000448183 RAP1AP62834 184 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TLE3Q04726 772 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 NSDHLQ15738 373 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 CST6Q15828 149 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TMEM244Q5VVB8 128 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 FAM83HQ6ZRV2 1179 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 LRRTM3Q86VH5 581 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TMEM102Q8N9M5 508 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 SIMC1Q8NDZ2 872 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 MDGA1Q8NFP4 955 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RAB40AQ8WXH6 277 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 DDIT4LQ96D03 193 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 GIMAP5Q96F15 307 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 EGLN2Q96KS0 407 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 INTS14Q96SY0 518 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TSPAN10Q9H1Z9 355 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 DZANK1Q9NVP4 752 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 APOBEC3BQ9UH17 382 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 KLK4Q9Y5K2 254 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF705FA8MVS1 300 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 FTCDNL1E5RQL4 147 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 DVL2O14641 736 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 P2RX6O15547 441 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RAD1O60671 282 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TGM6O95932 706 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF705DP0CH99 300 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF705BP0CI00 300 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RAC2P15153 192 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 JUNDP17535 347 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RAB3AP20336 220 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 C5AR1P21730 350 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 AHRP35869 848 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 POLR2HP52434 150 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TAS2R19P59542 299 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 PSPHP78330 225 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 EEF1A1P5Q5VTE0 462 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 MEPCEQ7L2J0 689 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF546Q86UE3 836 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RETREG3Q86VR2 466 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 LILRA2Q8N149 483 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 BOLLQ8N9W6 283 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 GPR26Q8NDV2 337 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 FOXRED1Q96CU9 486 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 FAM71F1Q96KD3 344 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 LPAR4Q99677 370 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 C20orf27Q9GZN8 174 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 HHLA2Q9UM44 414 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RCE1Q9Y256 329 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 A0A1W2PS29 197 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ANKRD28O15084 1053 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 LCMT2O60294 686 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 LILRB5O75023 590 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SERPINE2P07093 398 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 UBL4AP11441 157 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RBMS1P29558 406 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 NOVP48745 357 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RPS27AP62979 156 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 UBA52P62987 128 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 P2RY14Q15391 338 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TMEM25Q86YD3 366 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF100Q8IYN0 542 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SVBPQ8N300 66 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 DEFB119Q8N690 84 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RNF128Q8TEB7 428 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 FRZBQ92765 325 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 DIO2Q92813 273 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SLC17A9Q9BYT1 436 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 PITHD1Q9GZP4 211 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 OLAHQ9NV23 265 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 GPR34Q9UPC5 381 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ACTL7AQ9Y615 435 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 MYO18AQ92614 2054 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 hCG_1807616A0A1W2PRN6 198 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 GPRIN2O60269 458 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 MT-CO2P00403 227 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF322Q6U7Q0 402 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ACOT4Q8N9L9 421 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 WDSUB1Q8N9V3 476 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ACVR1CQ8NER5 493 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SLC2A12Q8TD20 617 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms