RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 TMEM178AQ8NBL3 297 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 TPD52L3Q96J77 140 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 FAM173AQ9BQD7 235 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 PINK1Q9BXM7 581 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 MUC13Q9H3R2 512 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 MED11Q9P086 117 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 MED12Q93074 2177 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 EPG5Q9HCE0 2579 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 BOD1L1Q8NFC6 3051 aa16.42■□□□□ 0.22
TRAPPC4-203ENST00000447216 TRIM3O75382 744 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 IFNA14P01570 189 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 MASP1P48740 699 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 PMP22Q01453 160 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 PLEKHN1Q494U1 663 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 RNF220Q5VTB9 566 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 SLC6A19Q695T7 634 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 LCN8Q6JVE9 175 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 ENPP6Q6UWR7 440 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 CBLL1Q75N03 491 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 ZNF771Q7L3S4 317 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 VTCN1Q7Z7D3 282 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 PACS2Q86VP3 889 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 TMCO5AQ8N6Q1 288 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 FAM86B1Q8N7N1 296 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 WDSUB1Q8N9V3 476 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 OIT3Q8WWZ8 545 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 ZNF597Q96LX8 424 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 FRMD6Q96NE9 622 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 WFDC6Q9BQY6 131 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 DSN1Q9H410 356 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 DCAF13Q9NV06 445 aaKnown RBP16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 ADPRHL2Q9NX46 363 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 DNAJB12Q9NXW2 375 aaKnown RBP16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 SLC35A3Q9Y2D2 325 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 MPDZO75970 2070 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 ZNF407Q9C0G0 2248 aa16.41■□□□□ 0.22
TRAPPC4-203ENST00000447216 DNAJC13O75165 2243 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 CDHR4A6H8M9 788 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 LRRC3CA6NJW4 275 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 M0R3H8 397 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 SNPHO15079 494 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 ZNF264O43296 627 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 SUV39H1O43463 412 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 HCRTR2O43614 444 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 CIB2O75838 187 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 SNX4O95219 450 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 STAMBPO95630 424 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 FESP07332 822 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 GKN3PP0CG01 181 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 ADH7P40394 386 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 CCR4P51679 360 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 HOXC5Q00444 222 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 C17orf67Q0P5P2 114 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 FOXO1Q12778 655 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 SKP2Q13309 424 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 FLOT2Q14254 428 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 EIPR1Q53HC9 387 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 CBLN3Q6UW01 205 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 CMIPQ8IY22 773 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 FAM71CQ8NEG0 241 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 BHLHE22Q8NFJ8 381 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 TMEM41AQ96HV5 264 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 HSH2DQ96JZ2 352 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 LRGUKQ96M69 825 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 LAT2Q9GZY6 243 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 SDHAF3Q9NRP4 125 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 RPS6KA6Q9UK32 745 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 FBXL2Q9UKC9 423 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 SLC13A4Q9UKG4 626 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 LHX6Q9UPM6 363 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 B3GNT3Q9Y2A9 372 aa16.4■□□□□ 0.22
TRAPPC4-203ENST00000447216 SVILO95425 2214 aa16.39■□□□□ 0.22
TRAPPC4-203ENST00000447216 TCRBV5S2A0A599 114 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 KLRC4-KLRK1H3BQV0 150 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 ADAM11O75078 769 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 PRKD3O94806 890 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 LGI1O95970 557 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 PRG2P13727 222 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 SELENOWP63302 87 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 C1orf146Q5VVC0 180 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 TIGD3Q6B0B8 471 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 PLCZ1Q86YW0 608 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 LACC1Q8IV20 430 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 MISPQ8IVT2 679 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR2M3Q8NG83 312 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR4K17Q8NGC6 315 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR4D11Q8NGI4 311 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR1J4Q8NGS1 313 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 B4GALNT2Q8NHY0 566 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 VANGL1Q8TAA9 524 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 RASSF5Q8WWW0 418 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 PROX1Q92786 737 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 RNF145Q96MT1 663 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 GNRHR2Q96P88 292 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 RAB3IPQ96QF0 476 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 SLC25A18Q9H1K4 315 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 BAG5Q9UL15 447 aa16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 BOKQ9UMX3 212 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC4-203ENST00000447216 PCDHGB6Q9Y5F9 930 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms