RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 PIGQQ9BRB3 760 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 NMUR2Q9GZQ4 415 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 PAIP1Q9H074 479 aaKnown RBP13.4□□□□□ -0.26
HDAC4-204ENST00000446876 QRSL1Q9H0R6 528 aaKnown RBP13.4□□□□□ -0.26
HDAC4-204ENST00000446876 FGFR1OP2Q9NVK5 253 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 WDR45Q9Y484 360 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 SERINC4A6NH21 518 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 GTPBP1O00178 669 aaKnown RBP13.39□□□□□ -0.27
HDAC4-204ENST00000446876 BCAS1O75363 584 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-204ENST00000446876 H6PDO95479 791 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 KRT75O95678 551 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 OPN1LWP04000 364 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 CHRM4P08173 479 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 UBL4AP11441 157 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ETFAP13804 333 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 MSX1P28360 303 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ATP4BP51164 291 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 CCR4P51679 360 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF41P51814 821 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-204ENST00000446876 SUCLG1P53597 346 aaKnown RBP13.39□□□□□ -0.27
HDAC4-204ENST00000446876 MVDP53602 400 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 CLDN20P56880 219 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 HPCAP84074 193 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 CHRNEQ04844 493 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 TOMM34Q15785 309 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF141Q15928 474 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 PAGE3Q5JUK9 113 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF619Q8N2I2 560 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 TMCO5AQ8N6Q1 288 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 LILRB4Q8NHJ6 448 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ZPLD1Q8TCW7 415 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ZG16BQ96DA0 208 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 RNF145Q96MT1 663 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 TMEM120AQ9BXJ8 343 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF385DQ9H6B1 395 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 TPT1P8Q9HAU6 139 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 SLC52A3Q9NQ40 469 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 ICAM5Q9UMF0 924 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 L3MBTL1Q9Y468 752 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 PCDHB14Q9Y5E9 798 aa13.39□□□□□ -0.27
HDAC4-204ENST00000446876 INTS1Q8N201 2190 aaKnown RBP13.39□□□□□ -0.27
HDAC4-204ENST00000446876 MBD3L4A6NDZ8 208 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 MBD3L3A6NE82 208 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 MBD3L5A6NJ08 208 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 CD8B2A6NJW9 211 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 FAM47E-STBD1D6RA91 191 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 H3BNH8 94 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 CYP7B1O75881 506 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 NUDT14O95848 222 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 LINGO3P0C6S8 592 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 ZCCHC18P0CG32 403 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 PEPDP12955 493 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 HOXB9P17482 250 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 IL11P20809 199 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 CEACAM8P31997 349 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 CRATP43155 626 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 P2RX1P51575 399 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 AGFG1P52594 562 aaKnown RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF136P52737 540 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 TFF3Q07654 80 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 FOXF1Q12946 379 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 MAPK11Q15759 364 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 GLYR1Q49A26 553 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 ADGRE4PQ86SQ3 457 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 LSRQ86X29 649 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 MSRB3Q8IXL7 192 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 RELL2Q8NC24 303 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 MBD3L2Q8NHZ7 208 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 STON2Q8WXE9 905 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 SAP130Q9H0E3 1048 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 SLC38A1Q9H2H9 487 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 TMEM185BQ9H7F4 350 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 NPDC1Q9NQX5 325 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-204ENST00000446876 SLC25A37Q9NYZ2 338 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 SLAMF8Q9P0V8 285 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 CLCF1Q9UBD9 225 aa13.38□□□□□ -0.27
HDAC4-204ENST00000446876 CACNA1DQ01668 2161 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 A0A087WZY1 265 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 A0A096LPI6 279 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 CLDN24A6NM45 220 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 HSPB2A8KAH6 182 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF264O43296 627 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 TGM6O95932 706 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 CSTAP01040 98 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 VIMP08670 466 aaKnown RBP13.37□□□□□ -0.27
HDAC4-204ENST00000446876 UBTFL6P0CB48 400 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-204ENST00000446876 NR2F1P10589 423 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF17P17021 662 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 BMP5P22003 454 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 PSMA4P25789 261 aaKnown RBP13.37□□□□□ -0.27
HDAC4-204ENST00000446876 TIMP3P35625 211 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 DSTNP60981 165 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 PLAURQ03405 335 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 FOXF2Q12947 444 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 SKP2Q13309 424 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms