RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CDHR4A6H8M9 788 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ETFAP13804 333 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 FUT1P19526 365 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 S100PP25815 95 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 PITX1P78337 314 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 PROX2Q3B8N5 592 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ACTBL2Q562R1 376 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 IGDCC3Q8IVU1 814 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 KLHDC8BQ8IXV7 354 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 OR52R1Q8NGF1 315 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 SLC6A20Q9NP91 592 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 GLI3P10071 1580 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 LRP5LA4QPB2 252 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 BTBD17A6NE02 478 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 A6NL46 340 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF587BE7ETH6 402 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 LINC01387J3KSC0 135 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 SMAD6O43541 496 aaKnown RBP8.02□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF806P0C7X5 589 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 NELFEP18615 380 aaKnown RBP8.02□□□□□ -1.12
PTPN3-204ENST00000446349 PSMA6P60900 246 aaKnown RBP8.02□□□□□ -1.12
PTPN3-204ENST00000446349 NNATQ16517 81 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 MEP1AQ16819 746 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 MPEG1Q2M385 716 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 PTERQ96BW5 349 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 MARCH7Q9H992 704 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 IGSF5Q9NSI5 407 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 SCN9AQ15858 1988 aa8.02□□□□□ -1.12
PTPN3-204ENST00000446349 RREB1Q92766 1687 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 H0YGG7 62 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 XPNPEP2O43895 674 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 CKMT2P17540 419 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 ARF3P61204 181 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF77Q15935 545 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SPATC1Q76KD6 591 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 TPRA1Q86W33 373 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 OR4K5Q8NGD3 323 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 OR52B6Q8NGF0 335 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 UBTD2Q8WUN7 234 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 FAM46AQ96IP4 442 aaKnown RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF350Q9GZX5 532 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 IGLV3-10A0A075B6K4 115 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 B4DXG7 233 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SNNO75324 88 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 CKMT1AP12532 417 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 CDKN2CP42773 168 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 EFNA3P52797 238 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 OLIG2Q13516 323 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 RNASE10Q5GAN6 216 aaKnown RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 PRMT8Q9NR22 394 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SCN4AP35499 1836 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 CNTRLQ7Z7A1 2325 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 NKX6-3A6NJ46 265 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SNX29P2Q8IUI4 249 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 PHTF2Q8N3S3 785 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 PAPOLGQ9BWT3 736 aaKnown RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 OSBPL7Q9BZF2 842 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 GORASP2Q9H8Y8 452 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 KIAA1217Q5T5P2 1943 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 MEIS3P2A8K0S8 358 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 PYCR1P32322 319 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 OR7A5Q15622 319 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 BCL2A1Q16548 175 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 CLVS2Q5SYC1 327 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 WDR88Q6ZMY6 472 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 PRSS48Q7RTY5 328 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SLC35F2Q8IXU6 374 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 GOT1L1Q8NHS2 421 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 TBC1D15Q8TC07 691 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 BOCQ9BWV1 1114 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 PBX4Q9BYU1 374 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 RNF38Q9H0F5 515 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 PPP1R14DQ9NXH3 145 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF443Q9Y2A4 671 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 TP53TG5Q9Y2B4 290 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 TAF1P21675 1872 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 ZCWPW2A0A1B0GU75 182 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 MROH6A6NGR9 719 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 H0YIG0 161 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 C1SP09871 688 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SLC35E2P0CK97 266 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 RAB3BP20337 219 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 POU3F4P49335 361 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 REEP5Q00765 189 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SHHQ15465 462 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 DEFB110Q30KQ9 67 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SAMD12Q8N8I0 201 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 LRRC20Q8TCA0 184 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM203Q969S6 136 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 SLC41A2Q96JW4 573 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 RLIMQ9NVW2 624 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 DNAJC15Q9Y5T4 150 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 C13orf42A0A1B0GVH6 325 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 TRAPPC2LH3BP13 241 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 CTNSO60931 367 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 VAMP5O95183 116 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 MT-ATP6P00846 226 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 CRYABP02511 175 aaKnown RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 EIF2B1Q14232 305 aaKnown RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 GRB7Q14451 532 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms