RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TGM3	Q08188	693 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	SREBF2	Q12772	1141 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	AANAT	Q16613	207 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	KLHL22	Q53GT1	634 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF628	Q5EBL2	1059 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	ENTPD8	Q5MY95	495 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	FAM46C	Q5VWP2	391 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	METAP1D	Q6UB28	335 aa	Predicted RBP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	KANSL1	Q7Z3B3	1105 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	UBE3D	Q7Z6J8	389 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	LRRC17	Q8N6Y2	441 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF655	Q8N720	491 aa	Predicted RBP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF671	Q8TAW3	534 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	TMEM163	Q8TC26	289 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	CDS1	Q92903	461 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	PPP1R16A	Q96I34	528 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	IFT27	Q9BW83	186 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	RNF208	Q9H0X6	261 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	PRELID3B	Q9Y3B1	194 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312		A0A1B0GVT2	93 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	RAD1	O60671	282 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	RGS11	O94810	467 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF806	P0C7X5	589 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	HOXB1	P14653	301 aa	Predicted RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	HOXB6	P17509	224 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	EVX1	P49640	407 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	RGS1	Q08116	209 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	PDE7A	Q13946	482 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	CDKL4	Q5MAI5	379 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	BHLHB9	Q6PI77	547 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	NUDT13	Q86X67	352 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TCEAL8	Q8IYN2	117 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	LINC01555	Q8NAE3	123 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	AP3S1	Q92572	193 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ZMYND19	Q96E35	227 aa	Predicted RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ALPK3	Q96L96	1907 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	VPS13A	Q96RL7	3174 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TMEM175	Q9BSA9	504 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ANAPC1	Q9H1A4	1944 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	OR10A4	Q9H209	315 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	SPHK1	Q9NYA1	384 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TAS2R7	Q9NYW3	318 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TRAPPC4	Q9Y296	219 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	COL4A6	Q14031	1691 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	DSPP	Q9NZW4	1301 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	IDS	B3KWA1	339 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	RHO	P08100	348 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	NTS	P30990	170 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	S100A12	P80511	92 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	MEDAG	Q5VYS4	303 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	QSOX2	Q6ZRP7	698 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	KLHL36	Q8N4N3	616 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	OR4E2	Q8NGC2	313 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	OR11H7	Q8NGC8	314 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	SETD6	Q8TBK2	473 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	APOBEC4	Q8WW27	367 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TRMT2B	Q96GJ1	504 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	MS4A8	Q9BY19	250 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	POLDIP3	Q9BY77	421 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	BCL2L14	Q9BZR8	327 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TMEM74B	Q9NUR3	256 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ZSCAN32	Q9NX65	697 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	SF3B6	Q9Y3B4	125 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	WDFY3	Q8IZQ1	3526 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	SLC9B1P1	A6NJY1	282 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	SLC31A1	O15431	190 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ADRB1	P08588	477 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	EPCAM	P16422	314 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	RAB3A	P20336	220 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	RPS27	P42677	84 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	KCNAB1	Q14722	419 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	HES5	Q5TA89	166 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	CDC73	Q6P1J9	531 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	RASSF6	Q6ZTQ3	369 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	OR13C2	Q8NGS9	318 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	DTD2	Q96FN9	168 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF578	Q96N58	590 aa	Predicted RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	FOXN4	Q96NZ1	517 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TMEM43	Q9BTV4	400 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	ALG8	Q9BVK2	526 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	CPEB1	Q9BZB8	566 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	AICDA	Q9GZX7	198 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	TMEM168	Q9H0V1	697 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	PPP1R3E	Q9H7J1	279 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	MBNL1	Q9NR56	388 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	STARD5	Q9NSY2	213 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	KCND3	Q9UK17	655 aa		11.69	□□□□□ -0.54
DDR1-238	ENST00000446312	C4orf47	A7E2U8	309 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312		E9PQ18	207 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	DOK2	O60496	412 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	LDB3	O75112	727 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	RPP14	O95059	124 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	CFD	P00746	253 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	SLC35G4	P0C7Q5	338 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF30	P17039	623 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	BTF3	P20290	206 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	MAOB	P27338	520 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	CCR8	P51685	355 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	KCNC3	Q14003	757 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	CXXC5	Q7LFL8	322 aa	Known RBP	11.68	□□□□□ -0.54

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