RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 OR52N1Q8NH53 320 aa7.5□□□□□ -1.21
VPS8-210ENST00000446204 ZNF296Q8WUU4 475 aaPredicted RBP7.5□□□□□ -1.21
VPS8-210ENST00000446204 ADAMTS14Q8WXS8 1223 aa7.5□□□□□ -1.21
VPS8-210ENST00000446204 NEDD4LQ96PU5 975 aa7.5□□□□□ -1.21
VPS8-210ENST00000446204 ZNF471Q9BX82 626 aaPredicted RBP7.5□□□□□ -1.21
VPS8-210ENST00000446204 HOXD1Q9GZZ0 328 aa7.5□□□□□ -1.21
VPS8-210ENST00000446204 POLMQ9NP87 494 aaPredicted RBP7.5□□□□□ -1.21
VPS8-210ENST00000446204 NDRG2Q9UN36 371 aaKnown RBP7.5□□□□□ -1.21
VPS8-210ENST00000446204 NRXN2Q9P2S2 1712 aa7.5□□□□□ -1.21
VPS8-210ENST00000446204 GYPBP06028 91 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SPARCP09486 303 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 CEBPBP17676 345 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 S1PR1P21453 382 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 OR1Q1Q15612 314 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 RAB12Q6IQ22 244 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 TCTN3Q6NUS6 607 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 PAQR6Q6TCH4 344 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SDR9C7Q8NEX9 313 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 OR2T4Q8NH00 348 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 RIT1Q92963 219 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 ARRDC3Q96B67 414 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 ELMOD3Q96FG2 381 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 FYTTD1Q96QD9 318 aaKnown RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 ZFYVE21Q9BQ24 234 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 MRI1Q9BV20 369 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 ALOXE3Q9BYJ1 711 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 OR8D2Q9GZM6 311 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SLC35A3Q9Y2D2 325 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 PLEKHA6Q9Y2H5 1048 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 MEMO1Q9Y316 297 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 FER1L6Q2WGJ9 1857 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 C11orf98E9PRG8 122 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 TLX3O43711 291 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 CPEP16870 476 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 FPR3P25089 353 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 PTBP1P26599 531 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■■■□ 26
VPS8-210ENST00000446204 NRG3P56975 720 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 ATXN7L3Q14CW9 347 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 FAAH2Q6GMR7 532 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 WASH2PQ6VEQ5 465 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SLC29A4Q7RTT9 530 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 OLIG3Q7RTU3 272 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 PRICKLE2Q7Z3G6 844 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 RNF113BQ8IZP6 322 aaKnown RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 MMP21Q8N119 569 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SPERTQ8NA61 448 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 OR5AK2Q8NH90 309 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 BCL7CQ8WUZ0 217 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 MMABQ96EY8 250 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 INSM2Q96T92 566 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 ANKRD19PQ9H560 264 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 OR6C2Q9NZP2 312 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 NUP50Q9UKX7 468 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 MYO10Q9HD67 2058 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 MCM3APO60318 1980 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 TRAV27A0A087WT01 109 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 C13orf42A0A1B0GVH6 325 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 NPIPA5E9PKD4 350 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 HMGN4O00479 90 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SHC1P29353 583 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 TRIM23P36406 574 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 CSRP3P50461 194 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 WNT3P56703 355 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 YBX1P67809 324 aaKnown RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 MRPS10P82664 201 aaKnown RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 GFOD2Q3B7J2 385 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 EIF5AL1Q6IS14 154 aaKnown RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 ACSM5Q6NUN0 579 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 MTFR2Q6P444 385 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 PDZD9Q8IXQ8 264 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 AVL9Q8NBF6 648 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 BEST4Q8NFU0 473 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 CREB3L4Q8TEY5 395 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 TSACCQ96A04 125 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 SCGB3A2Q96PL1 93 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 TIMM29Q9BSF4 260 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SGPP1Q9BX95 441 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 TAS2R3Q9NYW6 316 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 NPIPA1Q9UND3 350 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 DHDHQ9UQ10 334 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SIPA1L1O43166 1804 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 APC2O95996 2303 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 MN1Q10571 1320 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 OR5K4A6NMS3 321 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 WASH3PC4AMC7 463 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 ARPC1BO15143 372 aaKnown RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 FABP7O15540 132 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 HCRTR2O43614 444 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 LGI1O95970 557 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 MT-ND4P03905 459 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 RLN2P04090 185 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 SPNP16150 400 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 FUT1P19526 365 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 HOXA9P31269 272 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 PRKAR1BP31321 381 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 CCKBRP32239 447 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 CTXN1P60606 82 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 PRPS1P60891 318 aa7.49□□□□□ -1.21
VPS8-210ENST00000446204 EIF4EBP2Q13542 120 aaPredicted RBP7.49□□□□□ -1.21
VPS8-210ENST00000446204 POU4F3Q15319 338 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms