RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 FBXO45P0C2W1 286 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 RBMS2Q15434 407 aaKnown RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 DUSP7Q16829 419 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ASPGQ86U10 573 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 OR2T11Q8NH01 316 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 SLC39A13Q96H72 371 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 FAM83CQ9BQN1 747 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 HAPLN2Q9GZV7 340 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 OCEL1Q9H607 264 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 PLCXD1Q9NUJ7 323 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 FAM86C1Q9NVL1 165 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 STC2O76061 302 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 TP53P04637 393 aaPredicted RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 ALDOCP09972 364 aaKnown RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 APEX1P27695 318 aaKnown RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 RNF144AP50876 292 aaPredicted RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 PPT1P50897 306 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 PLK5Q496M5 336 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 OR4C11Q6IEV9 310 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 MRPL10Q7Z7H8 261 aaKnown RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 LRRC56Q8IYG6 542 aaPredicted RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 CYB561A3Q8NBI2 242 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 OR51L1Q8NGJ5 315 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 SFXN5Q8TD22 340 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 NIT2Q9NQR4 276 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 SLC2A4RGQ9NR83 387 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 B4DGG1 531 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 LEFTY1O75610 366 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 S100A11P31949 105 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 SGSHP51688 502 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 PM20D1Q6GTS8 502 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 IL17RDQ8NFM7 739 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 OR8D2Q9GZM6 311 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 BRF2Q9HAW0 419 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 FBXL2Q9UKC9 423 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 HLA-AP01891 365 aaKnown RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 CCINQ13939 588 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 TMEM225Q6GV28 225 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 LCN10Q6JVE6 187 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 CD200R1Q8TD46 325 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 HAS2Q92819 552 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 WDR77Q9BQA1 342 aaPredicted RBP17.54■□□□□ 0.4
SHANK3-203ENST00000445220 SAMD10Q9BYL1 202 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 MCCC2Q9HCC0 563 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 TMEM100Q9NV29 134 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 B3GALT1Q9Y5Z6 326 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 PTHP01270 115 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 SHDQ96IW2 340 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 PRRC1Q96M27 445 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 METTL7AQ9H8H3 244 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 SMCO4Q9NRQ5 59 aa17.54■□□□□ 0.4
SHANK3-203ENST00000445220 A8MXE2 369 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 PTGESO14684 152 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 PIM1P11309 404 aaPredicted RBP17.53■□□□□ 0.4
SHANK3-203ENST00000445220 PRDX3P30048 256 aaKnown RBP17.53■□□□□ 0.4
SHANK3-203ENST00000445220 C18orf63Q68DL7 685 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 HBMQ6B0K9 141 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 GLB1L2Q8IW92 636 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 PTGES2Q9H7Z7 377 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 TCRBP04435 133 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 NUDT1P36639 197 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 POLR2IP36954 125 aaKnown RBP17.53■□□□□ 0.4
SHANK3-203ENST00000445220 SGCAQ16586 387 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 TMEM200AQ86VY9 491 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 PKMYT1Q99640 499 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 ACTRT3Q9BYD9 372 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 CLMPQ9H6B4 373 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 VEGFDO43915 354 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 ATG12O94817 140 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 UBE2NLQ5JXB2 153 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 FOXB2Q5VYV0 432 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 ZC3H14Q6PJT7 736 aaKnown RBP17.53■□□□□ 0.4
SHANK3-203ENST00000445220 DUSP19Q8WTR2 217 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 SLC19A3Q9BZV2 496 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF860A6NHJ4 632 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 M0QZQ0 153 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 KIAA0355O15063 1070 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 ETV3P41162 512 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 CAV3P56539 151 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 UBE2KP61086 200 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 CDK3Q00526 305 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 PAN3Q58A45 887 aaKnown RBP17.53■□□□□ 0.4
SHANK3-203ENST00000445220 HIST2H3PS2Q5TEC6 136 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 GPR139Q6DWJ6 353 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 SCARB1Q8WTV0 552 aa17.53■□□□□ 0.4
SHANK3-203ENST00000445220 MEIS3P1A6NDR6 274 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 EFCAB7A8K855 629 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 SLC16A6O15403 523 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 ZDHHC11BP0C7U3 371 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 SLC2A5P22732 501 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 DAPP51397 102 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 CTXN1P60606 82 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 IL20RBQ6UXL0 311 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 OR4Q3Q8NH05 313 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 TOMM40LQ969M1 308 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 C4orf36Q96KX1 117 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 PRTFDC1Q9NRG1 225 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 UFSP2Q9NUQ7 469 aa17.52■□□□□ 0.4
SHANK3-203ENST00000445220 KIF25Q9UIL4 384 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms