RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 RPS6KB2Q9UBS0 482 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 ZNF223Q9UK11 482 aaPredicted RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 ERGIC3Q9Y282 383 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 M0R3G1 203 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 PIP5K1CO60331 668 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 RCBTB2O95199 551 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 LYPD3O95274 346 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 TGFBR2P37173 567 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 SERPINB10P48595 397 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 CTBP2P56545 445 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 SLC37A1P57057 533 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 CSTF1Q05048 431 aaKnown RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 DCTN2Q13561 401 aaKnown RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 CLPPQ16740 277 aaPredicted RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 PGGHGQ32M88 737 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 TIMM50Q3ZCQ8 353 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 LINC00299Q6ZSB3 139 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 TMPRSS11FQ6ZWK6 438 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 OR8D4Q8NGM9 314 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 ZNF582Q96NG8 517 aaPredicted RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 MND1Q9BWT6 205 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 MRPS18AQ9NVS2 196 aaKnown RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 CPED1A4D0V7 1026 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 FRG2CA6NGY1 282 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 SERINC4A6NH21 518 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 HYAL3O43820 417 aaPredicted RBP14.47□□□□□ -0.09
SNX13-204ENST00000444712 RAB36O95755 333 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 PTHP01270 115 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 CDK4P11802 303 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 IFI30P13284 250 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 MYF5P13349 255 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 BMP7P18075 431 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 PSPHP78330 225 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 AQP6Q13520 282 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 SPCS2Q15005 226 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 RHBDD2Q6NTF9 364 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 SLC46A3Q7Z3Q1 461 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 BMP8AQ7Z5Y6 402 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 C1orf210Q8IVY1 113 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.47□□□□□ -0.09
SNX13-204ENST00000444712 FGF11Q92914 225 aa14.47□□□□□ -0.09
SNX13-204ENST00000444712 ZC3H10Q96K80 434 aaKnown RBP14.47□□□□□ -0.09
SNX13-204ENST00000444712 CCNL2Q96S94 520 aaPredicted RBP14.47□□□□□ -0.09
SNX13-204ENST00000444712 ARID1BQ8NFD5 2236 aaPredicted RBP14.47□□□□□ -0.09
SNX13-204ENST00000444712 OR2W5A6NFC9 320 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 KDM4EB2RXH2 506 aaPredicted RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 M0R082 166 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 SIGLEC6O43699 453 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 CLPXO76031 633 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 IL33O95760 270 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 CSTAP01040 98 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 PDGFBP01127 241 aaPredicted RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 RPLP0P05388 317 aaKnown RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 ADH7P40394 386 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 ACAA2P42765 397 aaKnown RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 RAB40BQ12829 278 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 C1DQ13901 141 aaKnown RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 DGUOKQ16854 277 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 ARMCX4Q5H9R4 360 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 GUSBP11Q6P575 273 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 ULK3Q6PHR2 472 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 FANK1Q8TC84 345 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 SLC2A12Q8TD20 617 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 LCORQ96JN0 433 aaPredicted RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 UBQLN4Q9NRR5 601 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 SIDT1Q9NXL6 827 aaKnown RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 COPS7AQ9UBW8 275 aa14.46□□□□□ -0.09
SNX13-204ENST00000444712 DIMT1Q9UNQ2 313 aaKnown RBP14.46□□□□□ -0.09
SNX13-204ENST00000444712 RP1P56715 2156 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 A0A1B0GWA3 101 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 OR6C76A6NM76 312 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 SURF4O15260 269 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 AIREO43918 545 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 CER1O95813 267 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 IGKV3-11P04433 115 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 CFIP05156 583 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 HPGDP15428 266 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 GRK5P34947 590 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 LIPAP38571 399 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 CLK1P49759 484 aaKnown RBP14.46□□□□□ -0.1
SNX13-204ENST00000444712 GPR143P51810 404 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 PLAURQ03405 335 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 MED22Q15528 200 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 ALG10BQ5I7T1 473 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 ARHGAP22Q7Z5H3 698 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 PLPP5Q8NEB5 264 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 ANKK1Q8NFD2 765 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 TBC1D15Q8TC07 691 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 DNAJA4Q8WW22 397 aaPredicted RBP14.46□□□□□ -0.1
SNX13-204ENST00000444712 TSLPQ969D9 159 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 BPIFA2Q96DR5 249 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 DTNBP1Q96EV8 351 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 OR8D2Q9GZM6 311 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 TGIF2Q9GZN2 237 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 LRRN3Q9H3W5 708 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 GAREM1Q9H706 876 aa14.46□□□□□ -0.1
SNX13-204ENST00000444712 CHCHD3Q9NX63 227 aaKnown RBP14.46□□□□□ -0.1
SNX13-204ENST00000444712 PRUNE2Q8WUY3 3088 aa14.45□□□□□ -0.1
SNX13-204ENST00000444712 HTR3EA5X5Y0 456 aa14.45□□□□□ -0.1
SNX13-204ENST00000444712 EFCAB9A8MZ26 197 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms