RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 GIN1Q9NXP7 522 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 A0A0J9YW62 118 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 SKAP2O75563 359 aaPredicted RBP18.83■□□□□ 0.6
VSX1-206ENST00000444511 NUDT14O95848 222 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 KRT16P08779 473 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 HOXB4P17483 251 aaPredicted RBP18.83■□□□□ 0.6
VSX1-206ENST00000444511 IL11P20809 199 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 ADSLP30566 484 aaPredicted RBP18.83■□□□□ 0.6
VSX1-206ENST00000444511 EIF1P41567 113 aaKnown RBP18.83■□□□□ 0.6
VSX1-206ENST00000444511 LSM12Q3MHD2 195 aaKnown RBP18.83■□□□□ 0.6
VSX1-206ENST00000444511 C6orf136Q5SQH8 315 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 IL23RQ5VWK5 629 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 MTERF4Q7Z6M4 381 aaKnown RBP18.83■□□□□ 0.6
VSX1-206ENST00000444511 LILRA2Q8N149 483 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 OSTF1Q92882 214 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 C3orf30Q96M34 536 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 KLHL15Q96M94 604 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 HS3ST6Q96QI5 342 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 CCL19Q99731 98 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 KLHDC3Q9BQ90 382 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 HOXD1Q9GZZ0 328 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 CXorf36Q9H7Y0 433 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 FLNAP21333 2647 aaKnown RBP18.83■□□□□ 0.6
VSX1-206ENST00000444511 PCNX3Q9H6A9 2034 aa18.83■□□□□ 0.6
VSX1-206ENST00000444511 H3BNH8 94 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 SOX30O94993 753 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 C6orf47O95873 294 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 LINGO3P0C6S8 592 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 PPP3CBP16298 524 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 SFTPDP35247 375 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 CARD18P57730 90 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 ZNF117Q03924 483 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 FOXF1Q12946 379 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 Q5PR19 223 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 DCST2Q5T1A1 773 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 GTF2IRD2BQ6EKJ0 949 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 C22orf34Q6ZV56 151 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 GTF2IRD2Q86UP8 949 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 STK32CQ86UX6 486 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 LRRC75A-AS1Q8N1F1 130 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 KRTCAP2Q8N6L1 136 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 PSMA8Q8TAA3 256 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 TUBGCP3Q96CW5 907 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 REXO5Q96IC2 774 aaKnown RBP18.82■□□□□ 0.6
VSX1-206ENST00000444511 MARK4Q96L34 752 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 ROPN1BQ9BZX4 212 aaPredicted RBP18.82■□□□□ 0.6
VSX1-206ENST00000444511 ROPN1Q9HAT0 212 aaPredicted RBP18.82■□□□□ 0.6
VSX1-206ENST00000444511 ZDHHC2Q9UIJ5 367 aa18.82■□□□□ 0.6
VSX1-206ENST00000444511 NPIPA5A0A0B4J1W7 369 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 NPIPA7E9PJI5 369 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 CFLARO15519 480 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 TUBBP07437 444 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 INHBBP09529 407 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 PABPC4LP0CB38 370 aaKnown RBP18.81■□□□□ 0.6
VSX1-206ENST00000444511 NPIPA8P0DM63 369 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 PRPS1L1P21108 318 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 ARRB2P32121 409 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 RNF144AP50876 292 aaPredicted RBP18.81■□□□□ 0.6
VSX1-206ENST00000444511 VSNL1P62760 191 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 STAC2Q6ZMT1 411 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 C20orf204Q6ZNR8 217 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 BEND4Q6ZU67 534 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 MOAP1Q96BY2 351 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 COQ8BQ96D53 544 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 SMR3AQ99954 134 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 TIGARQ9NQ88 270 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 GPATCH2Q9NW75 528 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 CARD8Q9Y2G2 431 aa18.81■□□□□ 0.6
VSX1-206ENST00000444511 GTPBP1O00178 669 aaKnown RBP18.8■□□□□ 0.6
VSX1-206ENST00000444511 BPGMP07738 259 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 ELK4P28324 431 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 P2RX1P51575 399 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 SUMO3P55854 103 aaPredicted RBP18.8■□□□□ 0.6
VSX1-206ENST00000444511 KLHL26Q53HC5 615 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 BEX5Q5H9J7 111 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 CBLN3Q6UW01 205 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 ZNF614Q8N883 585 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 SFXN5Q8TD22 340 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 NUDT8Q8WV74 236 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 ROBO4Q8WZ75 1007 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 DUSP26Q9BV47 211 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 BHLHE41Q9C0J9 482 aaPredicted RBP18.8■□□□□ 0.6
VSX1-206ENST00000444511 C12orf49Q9H741 205 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 ZNF395Q9H8N7 513 aaPredicted RBP18.8■□□□□ 0.6
VSX1-206ENST00000444511 KCNE3Q9Y6H6 103 aa18.8■□□□□ 0.6
VSX1-206ENST00000444511 VPS13CQ709C8 3753 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.79■□□□□ 0.6
VSX1-206ENST00000444511 GJE1A6NN92 205 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 ZNF195O14628 629 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 OIP5O43482 229 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 THBDP07204 575 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 LOXP28300 417 aaPredicted RBP18.79■□□□□ 0.6
VSX1-206ENST00000444511 ADH6P28332 368 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 SHC1P29353 583 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 AGTR1P30556 359 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 SOAT1P35610 550 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 ATP12AP54707 1039 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 MAD2L1Q13257 205 aaPredicted RBP18.79■□□□□ 0.6
VSX1-206ENST00000444511 ZNF239Q16600 458 aaKnown RBP18.79■□□□□ 0.6
VSX1-206ENST00000444511 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms