RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CASKO14936 926 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 SYNGR4O95473 234 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 PLGP00747 810 aaPredicted RBP18.05■□□□□ 0.48
LRCH3-208ENST00000443727 EIF1P41567 113 aaKnown RBP18.05■□□□□ 0.48
LRCH3-208ENST00000443727 NME5P56597 212 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 WDR4P57081 412 aaKnown RBP18.05■□□□□ 0.48
LRCH3-208ENST00000443727 MAGOHP61326 146 aaKnown RBP18.05■□□□□ 0.48
LRCH3-208ENST00000443727 RAC1P63000 192 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 PDSS1Q5T2R2 415 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 ATG16L1Q676U5 607 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 C16orf62Q7Z3J2 963 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 BTLAQ7Z6A9 289 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 TMCO5AQ8N6Q1 288 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 OR10D3Q8NH80 312 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 TESCQ96BS2 214 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 DACH2Q96NX9 599 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 EXD2Q9NVH0 621 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 THAP1Q9NVV9 213 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 PAQR5Q9NXK6 330 aaPredicted RBP18.05■□□□□ 0.48
LRCH3-208ENST00000443727 NDRG3Q9UGV2 375 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 MCTS1Q9ULC4 181 aaKnown RBP18.05■□□□□ 0.48
LRCH3-208ENST00000443727 CARD8Q9Y2G2 431 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 DTNAQ9Y4J8 743 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 MED12LQ86YW9 2145 aa18.05■□□□□ 0.48
LRCH3-208ENST00000443727 SH3D21A4FU49 640 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 TRPC5OSA6NMA1 111 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 AK1P00568 194 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 KITP10721 976 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 UQCRC2P22695 453 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 S100A3P33764 101 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 KIR2DL2P43627 348 aaPredicted RBP18.04■□□□□ 0.48
LRCH3-208ENST00000443727 KCNJ5P48544 419 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 P2RX1P51575 399 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 ART1P52961 327 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 GPR68Q15743 365 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 DPY19L1Q2PZI1 675 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 FAM174BQ3ZCQ3 159 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 SPANXN4Q5MJ08 99 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 ATAD3BQ5T9A4 648 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 CDC20BQ86Y33 519 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 OR2V1Q8NHB1 315 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 RFWD2Q8NHY2 731 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 SDF2Q99470 211 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 NPAS1Q99742 590 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 SLC39A3Q9BRY0 314 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 OPN3Q9H1Y3 402 aaPredicted RBP18.04■□□□□ 0.48
LRCH3-208ENST00000443727 MARCOQ9UEW3 520 aaPredicted RBP18.04■□□□□ 0.48
LRCH3-208ENST00000443727 PCNX3Q9H6A9 2034 aa18.04■□□□□ 0.48
LRCH3-208ENST00000443727 NUP214P35658 2090 aaPredicted RBP18.03■□□□□ 0.48
LRCH3-208ENST00000443727 FAM221AA4D161 298 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 E9PBE3 544 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 TNFSF11O14788 317 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 CXCL13O43927 109 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 STX11O75558 287 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 AQP8O94778 261 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 CHI3L1P36222 383 aaPredicted RBP18.03■□□□□ 0.48
LRCH3-208ENST00000443727 CCR4P51679 360 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 CASP9P55211 416 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 SUMO3P55854 103 aaPredicted RBP18.03■□□□□ 0.48
LRCH3-208ENST00000443727 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.03■□□□□ 0.48
LRCH3-208ENST00000443727 HBMQ6B0K9 141 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 NXNQ6DKJ4 435 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 OGFOD2Q6N063 350 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 CBLN3Q6UW01 205 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 ESPNLQ6ZVH7 1005 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 SPATA19Q7Z5L4 167 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 LILRA2Q8N149 483 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 ZBTB18Q99592 522 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 KLHDC3Q9BQ90 382 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 OR51I1Q9H343 314 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 SERHL2Q9H4I8 314 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 PROCRQ9UNN8 238 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 EMC9Q9Y3B6 208 aa18.03■□□□□ 0.48
LRCH3-208ENST00000443727 TEP1Q99973 2627 aaKnown RBP18.03■□□□□ 0.48
LRCH3-208ENST00000443727 GOLGA8QA0A0J9YX86 632 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 GOLGA8OA6NCC3 632 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 GOLGA8NF8WBI6 632 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 SDHDO14521 159 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 ANKRD28O15084 1053 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 ADAMDEC1O15204 470 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 HDAC3O15379 428 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 OIP5O43482 229 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 CYP7B1O75881 506 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 AGR2O95994 175 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 LINGO3P0C6S8 592 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 UBL4AP11441 157 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 PSMA4P25789 261 aaKnown RBP18.02■□□□□ 0.48
LRCH3-208ENST00000443727 SFTPDP35247 375 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 CD79BP40259 229 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 SLC18A1P54219 525 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 CTBP2P56545 445 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 FAM27E3Q08E93 113 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 FOXF1Q12946 379 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 NDUFAF6Q330K2 333 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 BEND6Q5SZJ8 279 aaPredicted RBP18.02■□□□□ 0.48
LRCH3-208ENST00000443727 PDZK1Q5T2W1 519 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 TNFAIP8L2Q6P589 184 aaPredicted RBP18.02■□□□□ 0.48
LRCH3-208ENST00000443727 FAM214BQ7L5A3 538 aa18.02■□□□□ 0.48
LRCH3-208ENST00000443727 CHDHQ8NE62 594 aaPredicted RBP18.02■□□□□ 0.48
LRCH3-208ENST00000443727 TOR1AIP2Q8NFQ8 470 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms