RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ANXA4P09525 319 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-208ENST00000443046 ELK4P28324 431 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 EIF1P41567 113 aaKnown RBP12.72□□□□□ -0.37
HMGN1-208ENST00000443046 OR3A2P47893 321 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 HTR6P50406 440 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF41P51814 821 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF763Q0D2J5 394 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 C2orf80Q0P641 193 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 UNC50Q53HI1 259 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 TIMM23BQ5SRD1 257 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 FCRLAQ7L513 359 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 P2RY8Q86VZ1 359 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 FAM168AQ92567 244 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 REXO5Q96IC2 774 aaKnown RBP12.72□□□□□ -0.37
HMGN1-208ENST00000443046 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 EBPLQ9BY08 206 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 MRPL46Q9H2W6 279 aaKnown RBP12.72□□□□□ -0.37
HMGN1-208ENST00000443046 ACSS3Q9H6R3 686 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 MANSC1Q9H8J5 431 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 COQ10BQ9H8M1 238 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 L2HGDHQ9H9P8 463 aa12.72□□□□□ -0.37
HMGN1-208ENST00000443046 A0A1W2PQD3 144 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 SLC35F4A4IF30 521 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 VWC2LB2RUY7 222 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 UBFD1O14562 309 aaKnown RBP12.71□□□□□ -0.37
HMGN1-208ENST00000443046 LYZL6O75951 148 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 COX5AP20674 150 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 USF1P22415 310 aaPredicted RBP12.71□□□□□ -0.37
HMGN1-208ENST00000443046 EDNRAP25101 427 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 LCN1P31025 176 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 SFTPDP35247 375 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 RAB35Q15286 201 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 UAP1Q16222 522 aaPredicted RBP12.71□□□□□ -0.37
HMGN1-208ENST00000443046 FAM120AOSQ5T036 256 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 MISPQ8IVT2 679 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 SLC43A2Q8N370 569 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 MUC15Q8N387 334 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 CEP112Q8N8E3 955 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 GATSQ8NAP1 163 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 SPATA4Q8NEY3 305 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 METTL6Q8TCB7 284 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 GPR151Q8TDV0 419 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 HTRA1Q92743 480 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 MUCL1Q96DR8 90 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 NAPGQ99747 312 aaPredicted RBP12.71□□□□□ -0.37
HMGN1-208ENST00000443046 PSD2Q9BQI7 771 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 FUT8Q9BYC5 575 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 CXorf36Q9H7Y0 433 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 NTMQ9P121 344 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 PRSS50Q9UI38 385 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 WBP11Q9Y2W2 641 aaKnown RBP12.71□□□□□ -0.37
HMGN1-208ENST00000443046 ARFGEF3Q5TH69 2177 aa12.71□□□□□ -0.37
HMGN1-208ENST00000443046 MGAM2Q2M2H8 2515 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 RGS14O43566 566 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 KCNK2O95069 426 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 PGRP06401 933 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 PRPS2P11908 318 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 ENPP1P22413 925 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 IGHV1-2P23083 117 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 PRIM2P49643 509 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 GZMKP49863 264 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 GNG11P61952 73 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 LSM11P83369 360 aaKnown RBP eCLIP12.7□□□□□ -0.38
HMGN1-208ENST00000443046 RUNX1T1Q06455 604 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 FOXF1Q12946 379 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 CD226Q15762 336 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 EXOSC6Q5RKV6 272 aaKnown RBP12.7□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF678Q5SXM1 525 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 UBAP2Q5T6F2 1119 aaKnown RBP12.7□□□□□ -0.38
HMGN1-208ENST00000443046 B4GALNT2Q8NHY0 566 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF75CPQ92670 426 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-208ENST00000443046 GIMAP5Q96F15 307 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 SH3YL1Q96HL8 342 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-208ENST00000443046 UBQLN4Q9NRR5 601 aa12.7□□□□□ -0.38
HMGN1-208ENST00000443046 HEATR1Q9H583 2144 aaKnown RBP12.7□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF195O14628 629 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 SUPT7LO94864 414 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 CSF3P09919 207 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 GGT1P19440 569 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 NTSP30990 170 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 EFNA4P52798 201 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 STK11Q15831 433 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 TMEM176BQ3YBM2 270 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-208ENST00000443046 VPS26BQ4G0F5 336 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 ARL13AQ5H913 290 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-208ENST00000443046 FAM166AQ6J272 317 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 B3GLCTQ6Y288 498 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 GPRIN3Q6ZVF9 776 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 IL17RELQ6ZVW7 336 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF551Q7Z340 670 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF433Q8N7K0 673 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-208ENST00000443046 CDRT4Q8N9R6 151 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 OR6Y1Q8NGX8 325 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF524Q96C55 264 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 EQTNQ9NQ60 294 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 MIEF1Q9NQG6 463 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 KCNS2Q9ULS6 477 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms