RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 GXYLT2A0PJZ3 443 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 CCDC189A1A4V9 331 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 TMEM89A2RUT3 159 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 FAM157AC9JC47 383 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 M0R1B8 84 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 UPK1AO00322 258 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 RAD51DO75771 328 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 OXSR1O95747 527 aaPredicted RBP12.24□□□□□ -0.45
LINC00642-202ENST00000442515 CREB1P16220 341 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 ELK4P28324 431 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 IL2RGP31785 369 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 MPIP34949 423 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 CHRNEQ04844 493 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 ZNHIT3Q15649 155 aaPredicted RBP12.24□□□□□ -0.45
LINC00642-202ENST00000442515 SLC43A2Q8N370 569 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 ZNF433Q8N7K0 673 aaPredicted RBP12.24□□□□□ -0.45
LINC00642-202ENST00000442515 BBS4Q96RK4 519 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 LMF2Q9BU23 707 aaKnown RBP12.24□□□□□ -0.45
LINC00642-202ENST00000442515 TRIM31Q9BZY9 425 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 MYNNQ9NPC7 610 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 DDX18Q9NVP1 670 aaKnown RBP12.24□□□□□ -0.45
LINC00642-202ENST00000442515 RNF14Q9UBS8 474 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 PCTPQ9UKL6 214 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 ATP23Q9Y6H3 246 aa12.24□□□□□ -0.45
LINC00642-202ENST00000442515 A0A1W2PR80 420 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 SERINC4A6NH21 518 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 C9JVG2 144 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 PCDH7O60245 1069 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 KCNH1O95259 989 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 JUNP05412 331 aaKnown RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 GABRA3P34903 492 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 NCBP2P52298 156 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 ARL13AQ5H913 290 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 LETMD1Q6P1Q0 360 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 OR2L13Q8N349 312 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 ZNF540Q8NDQ6 660 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 OR4C3Q8NH37 302 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 ZFP90Q8TF47 636 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 PIK3R3Q92569 461 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 ZNF775Q96BV0 537 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 FBXO17Q96EF6 278 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 PHF21BQ96EK2 531 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 ZNF300Q96RE9 604 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 METTL17Q9H7H0 456 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 HHATLQ9HCP6 504 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 MYOZ1Q9NP98 299 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 VPS29Q9UBQ0 182 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 TRAF6Q9Y4K3 522 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 PCNX3Q9H6A9 2034 aa12.23□□□□□ -0.45
LINC00642-202ENST00000442515 KMT2CQ8NEZ4 4911 aaKnown RBP12.23□□□□□ -0.45
LINC00642-202ENST00000442515 GNG14A0A1W2PPG7 69 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 MYO1GB0I1T2 1018 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 RGS14O43566 566 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 EFNA2O43921 213 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 C2P06681 752 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 NGFRP08138 427 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 EIF1P41567 113 aaKnown RBP12.22□□□□□ -0.45
LINC00642-202ENST00000442515 PRIM2P49643 509 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 PHC1P78364 1004 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 RAE1P78406 368 aaKnown RBP12.22□□□□□ -0.45
LINC00642-202ENST00000442515 DR1Q01658 176 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 SLC29A2Q14542 456 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 HEPACAMQ14CZ8 416 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 ZSWIM7Q19AV6 140 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 SWI5Q1ZZU3 235 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 TMEM176BQ3YBM2 270 aaPredicted RBP12.22□□□□□ -0.45
LINC00642-202ENST00000442515 GLE1Q53GS7 698 aaKnown RBP12.22□□□□□ -0.45
LINC00642-202ENST00000442515 CYS1Q717R9 158 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 RPS27LQ71UM5 84 aaKnown RBP12.22□□□□□ -0.45
LINC00642-202ENST00000442515 KLHL7Q8IXQ5 586 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 ANKS4BQ8N8V4 417 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 LINC01356Q8N9X3 169 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 GPR78Q96P69 363 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 C3orf14Q9HBI5 128 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 NMRK1Q9NWW6 199 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 NTMQ9P121 344 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 DMGDHQ9UI17 866 aaKnown RBP12.22□□□□□ -0.45
LINC00642-202ENST00000442515 SNX6Q9UNH7 406 aa12.22□□□□□ -0.45
LINC00642-202ENST00000442515 CIB4A0PJX0 185 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 GJE1A6NN92 205 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 PPP6CO00743 305 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
LINC00642-202ENST00000442515 SLITRK5O94991 958 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 KLHL2O95198 593 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 IGHV3-9P01782 118 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
LINC00642-202ENST00000442515 LGALS3BPQ08380 585 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 RASGEF1BQ0VAM2 473 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 PRSS53Q2L4Q9 553 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 TECRLQ5HYJ1 363 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 KLC3Q6P597 504 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 C3orf62Q6ZUJ4 267 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 CCDC91Q7Z6B0 441 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 B4GALNT2Q8NHY0 566 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms