RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PIGUQ9H490 435 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 GSX1Q9H4S2 264 aaPredicted RBP10.56□□□□□ -0.72
TTC28-203ENST00000442232 TMEM185BQ9H7F4 350 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ATP6V1HQ9UI12 483 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 NAV3Q8IVL0 2385 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ARID1AO14497 2285 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 HEATR5AQ86XA9 2040 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SPAG7O75391 227 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SKAP2O75563 359 aaPredicted RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 OPN1LWP04000 364 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 ELK4P28324 431 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SFTPDP35247 375 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SLC6A8P48029 635 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 CCT3P49368 545 aaKnown RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 NR1H2P55055 460 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SUMO3P55854 103 aaPredicted RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 CARD18P57730 90 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 MAD2L1Q13257 205 aaPredicted RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 GUSBP1Q15486 140 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 TMEM201Q5SNT2 666 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 DCST2Q5T1A1 773 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 CDC73Q6P1J9 531 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 ZCCHC23Q6ZST2 131 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 ZAR1Q86SH2 424 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 TRABD2AQ86V40 505 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 CXorf67Q86X51 503 aaPredicted RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 LILRA2Q8N149 483 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 TMCO5AQ8N6Q1 288 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 OR7A2PQ8NGA2 310 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 OR2W6PQ8NHA6 318 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SFXN5Q8TD22 340 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 CPNE4Q96A23 557 aaPredicted RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 TUBGCP3Q96CW5 907 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 TACO1Q9BSH4 297 aaKnown RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 C12orf49Q9H741 205 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 PLSCR4Q9NRQ2 329 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SIRT3Q9NTG7 399 aaPredicted RBP10.55□□□□□ -0.72
TTC28-203ENST00000442232 GIN1Q9NXP7 522 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 SLC17A7Q9P2U7 560 aa10.55□□□□□ -0.72
TTC28-203ENST00000442232 ADAMDEC1O15204 470 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 SIAH2O43255 324 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 SLU7O95391 586 aaKnown RBP10.54□□□□□ -0.72
TTC28-203ENST00000442232 NUDT17P0C025 328 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 LAMP1P11279 417 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 PRPS1L1P21108 318 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 P2RX1P51575 399 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 CCR4P51679 360 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 ZNF117Q03924 483 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 LTBQ06643 244 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 FOXF1Q12946 379 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 PTGR1Q14914 329 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 RNPS1Q15287 305 aaKnown RBP10.54□□□□□ -0.72
TTC28-203ENST00000442232 CTU2Q2VPK5 515 aaKnown RBP10.54□□□□□ -0.72
TTC28-203ENST00000442232 XKR7Q5GH72 579 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 CLEC9AQ6UXN8 241 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 PLEKHM3Q6ZWE6 761 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 WFDC8Q8IUA0 241 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 TOR1AIP2Q8NFQ8 470 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 TCP10LQ8TDR4 215 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 OSTF1Q92882 214 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 PERPQ96FX8 193 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 ADGRG7Q96K78 797 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 BDH2Q9BUT1 245 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 ACTR6Q9GZN1 396 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 FBXO34Q9NWN3 711 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 GIMAP2Q9UG22 337 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 LGALS13Q9UHV8 139 aa10.54□□□□□ -0.72
TTC28-203ENST00000442232 GPC6Q9Y625 555 aaPredicted RBP10.54□□□□□ -0.72
TTC28-203ENST00000442232 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
TTC28-203ENST00000442232 A0A0J9YW62 118 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
TTC28-203ENST00000442232 C6orf47O95873 294 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 IL11P20809 199 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 IL32P24001 234 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 ADH6P28332 368 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 AGTR1P30556 359 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 SLC7A1P30825 629 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 CD226Q15762 336 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 ZNF239Q16600 458 aaKnown RBP10.53□□□□□ -0.72
TTC28-203ENST00000442232 PGS1Q32NB8 556 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 UGT3A2Q3SY77 523 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 C6orf136Q5SQH8 315 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 IL23RQ5VWK5 629 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 STAC2Q6ZMT1 411 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 YTHDF3Q7Z739 585 aaKnown RBP10.53□□□□□ -0.72
TTC28-203ENST00000442232 ATP6V1C2Q8NEY4 427 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 STEAP2Q8NFT2 490 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 RFWD2Q8NHY2 731 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 FBXO27Q8NI29 283 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 TMEM171Q8WVE6 324 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 Q96MF0 132 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 DUSP26Q9BV47 211 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 ROPN1BQ9BZX4 212 aaPredicted RBP10.53□□□□□ -0.72
TTC28-203ENST00000442232 BHLHE41Q9C0J9 482 aaPredicted RBP10.53□□□□□ -0.72
TTC28-203ENST00000442232 OR10A4Q9H209 315 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 CXorf56Q9H5V9 222 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 CXorf36Q9H7Y0 433 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 L2HGDHQ9H9P8 463 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 ROPN1Q9HAT0 212 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms