RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PDE9AO76083 593 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 PTHP01270 115 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 SERPINA7P05543 415 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 ALOX5P09917 674 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 HSD3B1P14060 373 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 GADD45AP24522 165 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 HSD3B2P26439 372 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 RPL3P39023 403 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 FRKP42685 505 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 KIR3DL1P43629 444 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 CSNK2BP67870 215 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 TUBA1BP68363 451 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 KCNJ8Q15842 424 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMEM201Q5SNT2 666 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 FHL5Q5TD97 284 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 FCRL6Q6DN72 434 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 TUBA1AQ71U36 451 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF595Q8IYB9 648 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 CCDC116Q8IYX3 515 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 FDCSPQ8NFU4 85 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 ADAMTS15Q8TE58 950 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 MAL2Q969L2 176 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 SPOCK3Q9BQ16 436 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 MENTQ9BUN1 341 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 MMP27Q9H306 513 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 KLK4Q9Y5K2 254 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC22A7Q9Y694 548 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 PKD1L2Q7Z442 2459 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 NADKO95544 446 aaPredicted RBP6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 FADS2O95864 444 aaKnown RBP6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 ITGB2P05107 769 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 HIST1H1TP22492 207 aaPredicted RBP6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 RORAP35398 523 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRIM2P49643 509 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 NCBP2P52298 156 aaKnown RBP eCLIP6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 RAB38P57729 211 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 TLE1Q04724 770 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 CAMK2BQ13554 666 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF181Q2M3W8 571 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 BHLHB9Q6PI77 547 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLCO4C1Q6ZQN7 724 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 BCORP1Q8N888 145 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPR151Q8TDV0 419 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 TRMT61AQ96FX7 289 aaKnown RBP6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 TPT1P8Q9HAU6 139 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 CCNB1IP1Q9NPC3 277 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRODH2Q9UF12 536 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 ERVK-19Q9WJR5 959 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 TPRKBQ9Y3C4 175 aa6.84□□□□□ -1.32
CDC42BPA-208ENST00000442054 GSTA4O15217 222 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PLGP00747 810 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 RAB40ALP0C0E4 278 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 CD36P16671 472 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PIK3CBP42338 1070 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 IL5RAQ01344 420 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PTPN13Q12923 2485 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 MICAQ29983 383 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 LANCL3Q6ZV70 420 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 GALNTL5Q7Z4T8 443 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 LAPTM4BQ86VI4 370 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 COMTD1Q86VU5 262 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PARP16Q8N5Y8 322 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 ATP6V1C2Q8NEY4 427 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 RORBQ92753 470 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PROX1Q92786 737 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 LRFN5Q96NI6 719 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR2A5Q96R48 311 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 WDR77Q9BQA1 342 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 WFDC6Q9BQY6 131 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 CENPOQ9BU64 300 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 SORBS1Q9BX66 1292 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PITHD1Q9GZP4 211 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 POLE4Q9NR33 117 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 MMACHCQ9Y4U1 282 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 GMPPBQ9Y5P6 360 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 V9GYH0 126 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 SSX4O60224 188 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 GALR3O60755 368 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PIPP12273 146 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 BTG2P78543 158 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 REEP5Q00765 189 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 PLCXD2Q0VAA5 305 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 DGUOKQ16854 277 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 EIF2S3LQ2VIR3 472 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 B3GNTL1Q67FW5 361 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 TCTN3Q6NUS6 607 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 GDPD3Q7L5L3 318 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC22A16Q86VW1 577 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF485Q8NCK3 441 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 FEVQ99581 238 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 SGPP1Q9BX95 441 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 VN1R1Q9GZP7 353 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 RIBC2Q9H4K1 309 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 RPS6KA6Q9UK32 745 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 TLN1Q9Y490 2541 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 FLNBO75369 2602 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 C2orf92A0A1B0GVN3 265 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 EPPINO95925 133 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 F8A1P23610 371 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms