RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CPSF4LA6NMK7 179 aaKnown RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 A8MVJ9 347 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 ZNF670-ZNF695F2Z2N8 137 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 SMLR1H3BR10 107 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 NOS1APO75052 506 aaPredicted RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 GPR75O95800 540 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 TNNI3P19429 210 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CRISP1P54107 249 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 TNK1Q13470 666 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 EXOSC7Q15024 291 aaKnown RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 DUSP5Q16690 384 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 TATDN3Q17R31 274 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 PYDC2Q56P42 97 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 OR52P1PQ8NH57 321 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 DIRAS2Q96HU8 199 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 SPACA7Q96KW9 195 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 PINK1Q9BXM7 581 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CLN6Q9NWW5 311 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CASC3O15234 703 aaKnown RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CSO75390 466 aaKnown RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 OR2B3O76000 313 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CDRT1O95170 752 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 ADAP00813 363 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 PSMA1P25786 263 aaKnown RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CNR2P34972 360 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 MAN2A2P49641 1150 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 RNF144AP50876 292 aaPredicted RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 RGS8P57771 180 aaPredicted RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 MANEAQ5SRI9 462 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CDC73Q6P1J9 531 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 RRM2BQ7LG56 351 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 IQCHQ86VS3 1027 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 CA13Q8N1Q1 262 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 OR2L13Q8N349 312 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 METTL27Q8N6F8 245 aaPredicted RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 IL4I1Q96RQ9 567 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 NARFLQ9H6Q4 476 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 PTGFRNQ9P2B2 879 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 KLHL21Q9UJP4 597 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 LSM2Q9Y333 95 aaKnown RBP13.16□□□□□ -0.3
LIMD1-202ENST00000440097 ALG5Q9Y673 324 aa13.16□□□□□ -0.3
LIMD1-202ENST00000440097 A0A1W2PQL4 384 aaPredicted RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 SH3D21A4FU49 640 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 EPPINO95925 133 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 DCNP07585 359 aaKnown RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 IGFBP1P08833 259 aaPredicted RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 TSPAN19P0C672 248 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 CLEC2LP0C7M8 214 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 M6PRP20645 277 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 CAPZBP47756 277 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 CDONQ4KMG0 1287 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 ZNF770Q6IQ21 691 aaPredicted RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 MEX3DQ86XN8 651 aaKnown RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 SLC34A3Q8N130 599 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 COX18Q8N8Q8 333 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 TWSG1Q9GZX9 223 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 SEC14L4Q9UDX3 406 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 STUB1Q9UNE7 303 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 A0A1W2PR77 199 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 CYR61O00622 381 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 CHST10O43529 356 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 ENTPD6O75354 484 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 AGR2O95994 175 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 C1QBP02746 253 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 ALAS2P22557 587 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 RHAGQ02094 409 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 HNRNPA0Q13151 305 aaKnown RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 NKAIN2Q5VXU1 208 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 CADM4Q8NFZ8 388 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 PRRC1Q96M27 445 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 TBC1D17Q9HA65 648 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 WNT16Q9UBV4 365 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 GPR55Q9Y2T6 319 aaPredicted RBP13.15□□□□□ -0.3
LIMD1-202ENST00000440097 CABIN1Q9Y6J0 2220 aa13.15□□□□□ -0.3
LIMD1-202ENST00000440097 HYKKA2RU49 373 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 ARRDC5A6NEK1 342 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 RHPN2P1A8MT19 583 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 LEUTXA8MZ59 168 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 B8ZZF3 427 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 OSMP13725 252 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 FASLGP48023 281 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 GFERP55789 205 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 MAT1AQ00266 395 aaKnown RBP13.15□□□□□ -0.31
LIMD1-202ENST00000440097 STX4Q12846 297 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 SPHARQ15513 63 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 ESCO2Q56NI9 601 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 TIGD3Q6B0B8 471 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 PLET1Q6UQ28 207 aa13.15□□□□□ -0.31
LIMD1-202ENST00000440097 GDPGP1Q6ZNW5 385 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms