RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 SF3A3Q12874 501 aaKnown RBP eCLIP14.91□□□□□ -0.02
TOM1-207ENST00000439512 SQLEQ14534 574 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 ZNF141Q15928 474 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 HSPB2Q16082 182 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 SYPL1Q16563 259 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 TMEM44Q2T9K0 475 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 TYW3Q6IPR3 259 aaKnown RBP14.91□□□□□ -0.02
TOM1-207ENST00000439512 PLXDC2Q6UX71 529 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 CHMP1BQ7LBR1 199 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 ANKFN1Q8N957 763 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 SMPDL3BQ92485 455 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 ZG16BQ96DA0 208 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 SPDL1Q96EA4 605 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 AURKBQ96GD4 344 aaPredicted RBP14.91□□□□□ -0.02
TOM1-207ENST00000439512 NPAS1Q99742 590 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 MED17Q9NVC6 651 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 KIAA1549Q9HCM3 1950 aa14.91□□□□□ -0.02
TOM1-207ENST00000439512 PCNX3Q9H6A9 2034 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 CLCA1A8K7I4 914 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 H0YC42 278 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 ZNF264O43296 627 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 SEC14L5O43304 696 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 CYP7B1O75881 506 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 H6PDO95479 791 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 NR2F1P10589 423 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 CD1EP15812 388 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 CEACAM8P31997 349 aaPredicted RBP14.9□□□□□ -0.02
TOM1-207ENST00000439512 CRATP43155 626 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 P2RX1P51575 399 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 SUCLG1P53597 346 aaKnown RBP14.9□□□□□ -0.02
TOM1-207ENST00000439512 TPD52P55327 224 aaPredicted RBP14.9□□□□□ -0.02
TOM1-207ENST00000439512 IRX1P78414 480 aaPredicted RBP14.9□□□□□ -0.02
TOM1-207ENST00000439512 TXNL4AP83876 142 aaKnown RBP14.9□□□□□ -0.02
TOM1-207ENST00000439512 HPCAP84074 193 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 CHRNEQ04844 493 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 MAPK14Q16539 360 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 PLPPR5Q32ZL2 321 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 FRRS1Q6ZNA5 592 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 HMGN2P46Q86SG4 172 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 MEIOBQ8N635 442 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 STON2Q8WXE9 905 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 ZBTB8AQ96BR9 441 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 TRNT1Q96Q11 434 aaKnown RBP14.9□□□□□ -0.02
TOM1-207ENST00000439512 SIKE1Q9BRV8 207 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 PAIP1Q9H074 479 aaKnown RBP14.9□□□□□ -0.02
TOM1-207ENST00000439512 SAP130Q9H0E3 1048 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 RABEP2Q9H5N1 569 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 POLE3Q9NRF9 147 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 FGFR1OP2Q9NVK5 253 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 ICAM5Q9UMF0 924 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 TRIM33Q9UPN9 1127 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 LIPT1Q9Y234 373 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 PCDHB14Q9Y5E9 798 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 AP4B1Q9Y6B7 739 aa14.9□□□□□ -0.02
TOM1-207ENST00000439512 CENPVL1A0A0U1RR11 272 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 EIF4E2O60573 245 aaKnown RBP14.89□□□□□ -0.03
TOM1-207ENST00000439512 CSTAP01040 98 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 OPN1LWP04000 364 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 GUSBP08236 651 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 SNRPB2P08579 225 aaKnown RBP14.89□□□□□ -0.03
TOM1-207ENST00000439512 TROVE2P10155 538 aaKnown RBP eCLIP14.89□□□□□ -0.03
TOM1-207ENST00000439512 UBL4AP11441 157 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 ETFAP13804 333 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 MVDP53602 400 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 CLDN15P56746 228 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 CLDN20P56880 219 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 EEFSECP57772 596 aaKnown RBP14.89□□□□□ -0.03
TOM1-207ENST00000439512 AP1ARQ63HQ0 302 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 EIF3MQ7L2H7 374 aaKnown RBP14.89□□□□□ -0.03
TOM1-207ENST00000439512 ZNF619Q8N2I2 560 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 GTPBP8Q8N3Z3 284 aaPredicted RBP14.89□□□□□ -0.03
TOM1-207ENST00000439512 TMCO5AQ8N6Q1 288 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 C9orf106Q8NAJ2 232 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 ACBD4Q8NC06 268 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 NAXEQ8NCW5 288 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 TMEM120AQ9BXJ8 343 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 QRSL1Q9H0R6 528 aaKnown RBP14.89□□□□□ -0.03
TOM1-207ENST00000439512 SLC52A3Q9NQ40 469 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 TMEM45AQ9NWC5 275 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 STOML1Q9UBI4 398 aa14.89□□□□□ -0.03
TOM1-207ENST00000439512 A0A096LPI6 279 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 MBD3L4A6NDZ8 208 aaPredicted RBP14.88□□□□□ -0.03
TOM1-207ENST00000439512 MBD3L3A6NE82 208 aaPredicted RBP14.88□□□□□ -0.03
TOM1-207ENST00000439512 MBD3L5A6NJ08 208 aaPredicted RBP14.88□□□□□ -0.03
TOM1-207ENST00000439512 CLIC1O00299 241 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 KIAA0513O60268 411 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 CHRM4P08173 479 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 LINGO3P0C6S8 592 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 UBTFL6P0CB48 400 aaPredicted RBP14.88□□□□□ -0.03
TOM1-207ENST00000439512 CAPN3P20807 821 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 BMP5P22003 454 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 MDH1P40925 334 aaKnown RBP14.88□□□□□ -0.03
TOM1-207ENST00000439512 MAGEA8P43361 318 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 CCR4P51679 360 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 AGFG1P52594 562 aaKnown RBP14.88□□□□□ -0.03
TOM1-207ENST00000439512 TOMM34Q15785 309 aaPredicted RBP14.88□□□□□ -0.03
TOM1-207ENST00000439512 PAGE3Q5JUK9 113 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 METTL21CQ5VZV1 264 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 CRYBG3Q68DQ2 2970 aa14.88□□□□□ -0.03
TOM1-207ENST00000439512 LRRC74BQ6ZQY2 392 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms