RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZNF808Q8N4W9 903 aaPredicted RBP11.32□□□□□ -0.6
NEK1-201ENST00000439128 RAB39BQ96DA2 213 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 TOR3AQ9H497 397 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 SLC7A8Q9UHI5 535 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 PKLRP30613 574 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 NKX3-2P78367 333 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 C17orf67Q0P5P2 114 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 TNFAIP8L3Q5GJ75 292 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 FAM111BQ6SJ93 734 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 SGCZQ96LD1 299 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 ACPTQ9BZG2 426 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 LRFN1Q9P244 771 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 RIMS3Q9UJD0 308 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 ZNF443Q9Y2A4 671 aaPredicted RBP11.32□□□□□ -0.6
NEK1-201ENST00000439128 GABRR3A8MPY1 467 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 CELP19835 753 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 IMPA1P29218 277 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 SLC35A1P78382 337 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 MISPQ8IVT2 679 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 EXD3Q8N9H8 876 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 OR4K5Q8NGD3 323 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 IER2Q9BTL4 223 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 MED18Q9BUE0 208 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 RDH8Q9NYR8 311 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 CNIH4Q9P003 139 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 ZNF69Q9UC07 566 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 SH2B3Q9UQQ2 575 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 MYH8P13535 1937 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 M0R129 80 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 UTS2O95399 124 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 OPRD1P41143 372 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 AP2S1P53680 142 aaPredicted RBP11.32□□□□□ -0.6
NEK1-201ENST00000439128 BCL7AQ4VC05 210 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 TMEM71Q6P5X7 295 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 WFDC8Q8IUA0 241 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 LILRA3Q8N6C8 439 aaPredicted RBP11.32□□□□□ -0.6
NEK1-201ENST00000439128 ZNF709Q8N972 641 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 CXorf21Q9HAI6 301 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 POLE3Q9NRF9 147 aa11.32□□□□□ -0.6
NEK1-201ENST00000439128 PRAMEF25A6NGN4 478 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 FIGNL2A6NMB9 653 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 ZNF587BE7ETH6 402 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 DLL1O00548 723 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 DBHP09172 617 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 CKMT1AP12532 417 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SDC1P18827 310 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 OR8B8Q15620 311 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 YOD1Q5VVQ6 348 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 AFMIDQ63HM1 303 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 CYS1Q717R9 158 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 MED25Q71SY5 747 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 RELL1Q8IUW5 271 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 OR2I1PQ8NGU4 316 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 WSB2Q9NYS7 404 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 RGS6P49758 472 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 POLR2HP52434 150 aaKnown RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 KCNAB2Q13303 367 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 GTDC1Q4AE62 458 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 KCTD11Q693B1 232 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 MOB3CQ70IA8 216 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 CEACAM19Q7Z692 300 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 VTCN1Q7Z7D3 282 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 VRK2Q86Y07 508 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SDR9C7Q8NEX9 313 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 OR5M1Q8NGP8 315 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 PIGCQ92535 297 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SARAFQ96BY9 339 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SLC30A3Q99726 388 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 FAM118AQ9NWS6 357 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 PAK1IP1Q9NWT1 392 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 BTNL2Q9UIR0 455 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 ATP23Q9Y6H3 246 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SLC2A2P11168 524 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 CD53P19397 219 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 PIN1Q13526 163 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 SLC10A1Q14973 349 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SLC5A12Q1EHB4 618 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 C18orf63Q68DL7 685 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 PLPP6Q8IY26 295 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 SLC46A1Q96NT5 459 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 MICU1Q9BPX6 476 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 PSKH1P11801 424 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 FOXA1P55317 472 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 REEP5Q00765 189 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 MOGQ16653 247 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 ERMP1Q7Z2K6 904 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 CYB561A3Q8NBI2 242 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 H1FXQ92522 213 aaKnown RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
NEK1-201ENST00000439128 PKP2Q99959 881 aa11.31□□□□□ -0.6
NEK1-201ENST00000439128 OSBPL7Q9BZF2 842 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms