RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 NMBRP28336 390 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 CALCRP30988 508 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 KRT20P35900 424 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 RPL4P36578 427 aaKnown RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 NAP1L1P55209 391 aaKnown RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 POU3F1Q03052 451 aaPredicted RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 AP5B1Q2VPB7 878 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 OTUD3Q5T2D3 398 aaPredicted RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 CDKAL1Q5VV42 579 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 BRD3OSQ6XYD6 125 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 BBS12Q6ZW61 710 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 IKBIPQ70UQ0 350 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 KRT78Q8N1N4 520 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 SLC43A2Q8N370 569 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 GTPBP8Q8N3Z3 284 aaPredicted RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 C17orf78Q8N4C9 275 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 SRFBP1Q8NEF9 429 aaKnown RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 NUP37Q8NFH4 326 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 UHMK1Q8TAS1 419 aaKnown RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 EEF1AKMT1Q8WVE0 214 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 SLC38A2Q96QD8 506 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 HEMGNQ9BXL5 484 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 CNTD2Q9H8S5 307 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 SDHAF3Q9NRP4 125 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 INTS10Q9NVR2 710 aaKnown RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 LYARQ9NX58 379 aaKnown RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 FLRT3Q9NZU0 649 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 REV1Q9UBZ9 1251 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 SOX13Q9UN79 622 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 ZKSCAN5Q9Y2L8 839 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 ATP6V1DQ9Y5K8 247 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 POMT1Q9Y6A1 747 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 A0A087X0T9 212 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 ZNF816-ZNF321PA0A0X1KG74 233 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 SAP18O00422 153 aaKnown RBP9.41□□□□□ -0.9
RTN4-211ENST00000438462 PSMD3O43242 534 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 VAPBO95292 243 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 GSNP06396 782 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 FAM228BP0C875 321 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 NR2F6P10588 404 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 PSMA4P25789 261 aaKnown RBP9.41□□□□□ -0.9
RTN4-211ENST00000438462 RAD52P43351 418 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 PPICP45877 212 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 AP1S2P56377 157 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 CRADDP78560 199 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 MRPS11P82912 194 aaKnown RBP9.41□□□□□ -0.9
RTN4-211ENST00000438462 NAAAQ02083 359 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 ASTE1Q2TB18 679 aaPredicted RBP9.41□□□□□ -0.9
RTN4-211ENST00000438462 REP15Q6BDI9 236 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 LRRC8EQ6NSJ5 796 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 CENPUQ71F23 418 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 DUSP19Q8WTR2 217 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 R3HDM4Q96D70 268 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 ANKRD27Q96NW4 1050 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 GAL3ST1Q99999 423 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 LRRC1Q9BTT6 524 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 IARS2Q9NSE4 1012 aaKnown RBP9.41□□□□□ -0.9
RTN4-211ENST00000438462 WIPI2Q9Y4P8 454 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 INSIG2Q9Y5U4 225 aa9.41□□□□□ -0.9
RTN4-211ENST00000438462 TRAPPC2LH3BP13 241 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 SYNGR3O43761 229 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 MGRN1O60291 552 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 CDC14BO60729 498 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 FOXH1O75593 365 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 WNT11O96014 354 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 OGNP20774 298 aaKnown RBP9.4□□□□□ -0.9
RTN4-211ENST00000438462 HOXD3P31249 432 aaPredicted RBP9.4□□□□□ -0.9
RTN4-211ENST00000438462 PNLIPRP2P54317 469 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 MANFP55145 182 aaKnown RBP9.4□□□□□ -0.9
RTN4-211ENST00000438462 PRPS1P60891 318 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 HGFACQ04756 655 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 KLHL24Q6TFL4 600 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 GALNT5Q7Z7M9 940 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 LILRA2Q8N149 483 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 MYO1HQ8N1T3 1032 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 BHLHE22Q8NFJ8 381 aaPredicted RBP9.4□□□□□ -0.9
RTN4-211ENST00000438462 OR4F15Q8NGB8 312 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 CFHR4Q92496 578 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 ZNF75CPQ92670 426 aaPredicted RBP9.4□□□□□ -0.9
RTN4-211ENST00000438462 SIGLEC10Q96LC7 697 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 MS4A8Q9BY19 250 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 TRIM54Q9BYV2 358 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 CCDC68Q9H2F9 335 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 NT5DC2Q9H857 520 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 SEC61A2Q9H9S3 476 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 NOX4Q9NPH5 578 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 MALT1Q9UDY8 824 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 ACTL7BQ9Y614 415 aa9.4□□□□□ -0.9
RTN4-211ENST00000438462 VSTM5A8MXK1 200 aa9.39□□□□□ -0.91
RTN4-211ENST00000438462 FADS1O60427 444 aa9.39□□□□□ -0.91
RTN4-211ENST00000438462 CECR9P0C854 216 aa9.39□□□□□ -0.91
RTN4-211ENST00000438462 GNAZP19086 355 aa9.39□□□□□ -0.91
RTN4-211ENST00000438462 NTF4P34130 210 aa9.39□□□□□ -0.91
RTN4-211ENST00000438462 ALDH3B1P43353 468 aa9.39□□□□□ -0.91
RTN4-211ENST00000438462 CORO7P57737 925 aa9.39□□□□□ -0.91
RTN4-211ENST00000438462 EGFEM1PQ0D2K5 195 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms