RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RGS9BPQ6ZS82 235 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 SLC38A6Q8IZM9 456 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 LRRC43Q8N309 656 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 TRUB1Q8WWH5 349 aaKnown RBP2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 SENP8Q96LD8 212 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 CNOT6LQ96LI5 555 aaKnown RBP2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 RIT2Q99578 217 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 TSSK1BQ9BXA7 367 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 ELOVL4Q9GZR5 314 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 GLT8D2Q9H1C3 349 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 MIEF1Q9NQG6 463 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 PNO1Q9NRX1 252 aaKnown RBP2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 RNF14Q9UBS8 474 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 TBK1Q9UHD2 729 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 MRPS33Q9Y291 106 aaKnown RBP2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 WDR45Q9Y484 360 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 MAD1L1Q9Y6D9 718 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 ARHGEF11O15085 1522 aa2.71□□□□□ -1.98
TRAPPC13-204ENST00000438419 LRRK1Q38SD2 2015 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 RAI1Q7Z5J4 1906 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 IGHV3-35A0A0C4DH35 117 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 FRG2CA6NGY1 282 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 E9PLD3 99 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 MPHOSPH10O00566 681 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 SLC17A2O00624 439 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 DUSP14O95147 198 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 ADCY5O95622 1261 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 KRTAP1-4P0C5Y4 121 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 CPN1P15169 458 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 KLK2P20151 261 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 NT5EP21589 574 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 OTX2P32243 289 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 HPCAL1P37235 193 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 DHPSP49366 369 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 LIM2P55344 173 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 ERVPABLB-1P60509 514 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 IGLV3-21P80748 117 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 OTUD4Q01804 1114 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 ZNF154Q13106 437 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 KCNJ11Q14654 390 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 TGIF1Q15583 401 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 RNF212Q495C1 297 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 FAM120AOSQ5T036 256 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 FHL5Q5TD97 284 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 TTC23Q5W5X9 447 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 APTXQ7Z2E3 356 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 CNPY4Q8N129 248 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 STXBP6Q8NFX7 210 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 OR2T3Q8NH03 318 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 CCDC26Q8TAB7 109 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 TMEM80Q96HE8 168 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 CRACR2AQ9BSW2 395 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 ZSCAN5AQ9BUG6 496 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 DEFB126Q9BYW3 111 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 CRNKL1Q9BZJ0 848 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 POLR1EQ9GZS1 481 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 SLITRK2Q9H156 845 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 NXF5Q9H1B4 397 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 ZNF275Q9NSD4 429 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 DPM3Q9P2X0 92 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 B4GALT7Q9UBV7 327 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 LCMT1Q9UIC8 334 aa2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 MRPS7Q9Y2R9 242 aaKnown RBP2.7□□□□□ -1.98
TRAPPC13-204ENST00000438419 IGKV6D-41A0A0C4DH26 115 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 H3BMQ9 156 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 CA1P00915 261 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 GIG44P09565 113 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 HNF1AP20823 631 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 TBXA2RP21731 343 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 CALB2P22676 271 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 IGHV1-2P23083 117 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 GLRA2P23416 452 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 PRKAR2BP31323 418 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 XCR1P46094 333 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 GBX2P52951 348 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 RND3P61587 244 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 VLDLRP98155 873 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 SPIBQ01892 262 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 CD47Q08722 323 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 ASAH1Q13510 395 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 SYPL1Q16563 259 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 QRICH1Q2TAL8 776 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 GGTA1PQ4G0N0 100 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 C10orf120Q5SQS8 335 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 CASC1Q6TDU7 716 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 VASH2Q86V25 355 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 C9orf40Q8IXQ3 194 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 OR52M1Q8NGK5 317 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 OR9A4Q8NGU2 314 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 FBXO30Q8TB52 745 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 IL1F10Q8WWZ1 152 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 C12orf66Q96MD2 445 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 SLC6A7Q99884 636 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 DUSP16Q9BY84 665 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 GORASP2Q9H8Y8 452 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 PAK1IP1Q9NWT1 392 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 VNN3Q9NY84 501 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 Q9UF83 564 aa2.69□□□□□ -1.98
TRAPPC13-204ENST00000438419 L3MBTL1Q9Y468 752 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms