RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 HSPA4LO95757 839 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 OPN1LWP04000 364 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 FAM153BP0C7A2 387 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 NEFHP12036 1026 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ME2P23368 584 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 CRHR1P34998 444 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 GPC1P35052 558 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 EIF1P41567 113 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 MANFP55145 182 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 SUMO3P55854 103 aaPredicted RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 RPS4XP62701 263 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ZNF117Q03924 483 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 RNPS1Q15287 305 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 TAB1Q15750 504 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 CCDC153Q494R4 210 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 FAM153CQ494X1 144 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 RFTN2Q52LD8 501 aaPredicted RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 NCMAPQ5T1S8 102 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 CCNJQ5T5M9 372 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 KANK2Q63ZY3 851 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 HEPHL1Q6MZM0 1159 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PPP4R4Q6NUP7 873 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 CBLN3Q6UW01 205 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 NUFIP2Q7Z417 695 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 COX18Q8N8Q8 333 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 STEAP2Q8NFT2 490 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 B4GALNT2Q8NHY0 566 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PSMA8Q8TAA3 256 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 OSTF1Q92882 214 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ZNF524Q96C55 264 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 C16orf58Q96GQ5 468 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 SH3YL1Q96HL8 342 aaPredicted RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 BTBD2Q9BX70 525 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 HDHD5Q9BXW7 423 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 POTEKPQ9BYX7 375 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ING1Q9UK53 422 aaPredicted RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ICAM5Q9UMF0 924 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 LAMP3Q9UQV4 416 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 TMED5Q9Y3A6 229 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 RNF115Q9Y4L5 304 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ACTL7BQ9Y614 415 aa9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ANK3Q12955 4377 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PRR14LQ5THK1 2151 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 UQCRHLA0A096LP55 91 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 SCDO00767 359 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 OIP5O43482 229 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 RGS14O43566 566 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 CRCPO75575 148 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PABPC4LP0CB38 370 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 SFTPDP35247 375 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 SERPINB4P48594 390 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 RPL38P63173 70 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 DMTNQ08495 405 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 CLEC12BQ2HXU8 276 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PGGHGQ32M88 737 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 KLHL26Q53HC5 615 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PDSS1Q5T2R2 415 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 SFRP5Q5T4F7 317 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 LIPMQ5VYY2 423 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 GTF2IRD2BQ6EKJ0 949 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 MTERF4Q7Z6M4 381 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ATG4DQ86TL0 474 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 GTF2IRD2Q86UP8 949 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 LILRA2Q8N149 483 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ROBO4Q8WZ75 1007 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 FBXW5Q969U6 566 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 MTERF3Q96E29 417 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 OTUB1Q96FW1 271 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 TSSK3Q96PN8 268 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 TACO1Q9BSH4 297 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 TRIM2Q9C040 744 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 IQCGQ9H095 443 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PIGUQ9H490 435 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 C12orf49Q9H741 205 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 BCO1Q9HAY6 547 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 TBK1Q9UHD2 729 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 DNAJC15Q9Y5T4 150 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 MAGED1Q9Y5V3 778 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 FBN1P35555 2871 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PCNX3Q9H6A9 2034 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 A0A096LNT2 108 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 GOLGA8QA0A0J9YX86 632 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 GOLGA8OA6NCC3 632 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 GJE1A6NN92 205 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ZNF814B7Z6K7 855 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 GOLGA8NF8WBI6 632 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 SCAMP2O15127 329 aaKnown RBP9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 AKAP10O43572 662 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 DNAJA2O60884 412 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 HMGN2P05204 90 aaKnown RBP9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ALOX5P09917 674 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 HPGDP15428 266 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PRKCAP17252 672 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 COX5AP20674 150 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 ASMTP46597 345 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 PRKAG1P54619 331 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 CARD18P57730 90 aa9.72□□□□□ -0.85
SPTLC1P4-201ENST00000435997 POU6F2P78424 691 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms