RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 HERVK_113Q902F9 699 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 GHSRQ92847 366 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 C16orf58Q96GQ5 468 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 OR1F2PQ96R84 312 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC38A3Q99624 504 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 TRMT61BQ9BVS5 477 aaKnown RBP10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 IFT27Q9BW83 186 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 HCAR1Q9BXC0 346 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC6A17Q9H1V8 727 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 EVA1AQ9H8M9 152 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 PRKAG2Q9UGJ0 569 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 MRTO4Q9UKD2 239 aaKnown RBP10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 PRELID3BQ9Y3B1 194 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 KCNE3Q9Y6H6 103 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 AIPO00170 330 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 ASGR1P07306 291 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 NCBP2P52298 156 aaKnown RBP eCLIP10.77□□□□□ -0.691e-7■□□□□ 11
HMGCS1-202ENST00000433297 HCCSP53701 268 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 KLF9Q13886 244 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 FAM74A1Q5RGS3 127 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 ZDHHC20Q5W0Z9 365 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 TMEM88Q6PEY1 159 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 C11orf88Q6PI97 169 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 ADCK2Q7Z695 626 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 OR8K3Q8NH51 312 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 OR52I2Q8NH67 350 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 ZDHHC1Q8WTX9 485 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 TMEM255BQ8WV15 326 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 ATOH1Q92858 354 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 PELOQ9BRX2 385 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 ZCCHC2Q9C0B9 1178 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 MARK1Q9P0L2 795 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 H7C2Y5 167 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 PPM1DO15297 605 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 CREBL2O60519 120 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 IGF2P01344 180 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 IGHA1P01876 353 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 FGBP02675 491 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 MT-ND5P03915 603 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 RLN1P04808 185 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 HMGA1P17096 107 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 HLA-FP30511 346 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 CYB561A3Q8NBI2 242 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 LGALS14Q8TCE9 139 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 PAWRQ96IZ0 340 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 DERL3Q96Q80 235 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 BBS4Q96RK4 519 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 LYSMD1Q96S90 227 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 IFT22Q9H7X7 185 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 TAS2R3Q9NYW6 316 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 CXXC1Q9P0U4 656 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 PIPOXQ9P0Z9 390 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 ICKQ9UPZ9 632 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 EXOGQ9Y2C4 368 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 RNF215Q9Y6U7 377 aa10.77□□□□□ -0.69
HMGCS1-202ENST00000433297 A0A0G2JK05 382 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 ANTXRLA6NF34 631 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 D6RAR5 112 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 TMEM189-UBE2V1I3L0A0 370 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 SMAD9O15198 467 aaKnown RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 LDOC1O95751 146 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 CLTBP09497 229 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 CLUP10909 449 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 SEC61A1P61619 476 aaKnown RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 ST3GAL3Q11203 375 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 SPOUT1Q5T280 376 aaKnown RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 HACD4Q5VWC8 232 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 GSG1LQ6UXU4 331 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 LRRC56Q8IYG6 542 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 CMTM8Q8IZV2 173 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 AMER3Q8N944 861 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 ZNF707Q96C28 371 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 ARSGQ96EG1 525 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 SEMA4CQ9C0C4 833 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 TMEM138Q9NPI0 162 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 FANCFQ9NPI8 374 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 MED11Q9P086 117 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 TUBAL3A6NHL2 446 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 LINC01387J3KSC0 135 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 DNASE2O00115 360 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 CDC42EP2O14613 210 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 FLRT2O43155 660 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 STX11O75558 287 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 NFATC1O95644 943 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 WDPCPO95876 746 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 HMGN2P05204 90 aaKnown RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 OMPP47874 163 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 RGS8P57771 180 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 GK2Q14410 553 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 LRRN1Q6UXK5 716 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 CCDC116Q8IYX3 515 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 OR5M1Q8NGP8 315 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 SLC6A20Q9NP91 592 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 NPTNQ9Y639 398 aa10.76□□□□□ -0.69
HMGCS1-202ENST00000433297 EOMESO95936 686 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 EGFP01133 1207 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 CKMP06732 381 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 FGF2P09038 288 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms