RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 OR6K3Q8NGY3 331 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 B4GALNT2Q8NHY0 566 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 NEUROG1Q92886 237 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 GMPPAQ96IJ6 420 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 COX4I2Q96KJ9 171 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 FCRL1Q96LA6 429 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PPP1R36Q96LQ0 422 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PLSCR4Q9NRQ2 329 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 MCTS1Q9ULC4 181 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 INAFM1C9JVW0 142 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 LINC01387J3KSC0 135 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 C6orf47O95873 294 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 FCGR2AP12318 317 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF17P17021 662 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 FPR1P21462 350 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 AGTR1P30556 359 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 ARRB2P32121 409 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 FRKP42685 505 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 CARD18P57730 90 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 RPS26P62854 115 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 UGT3A2Q3SY77 523 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 PLEKHM3Q6ZWE6 761 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 TUSC5Q8IXB3 177 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 OR5D16Q8NGK9 328 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 S100PBPQ96BU1 408 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 CXorf36Q9H7Y0 433 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 UBQLN4Q9NRR5 601 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 WBP11Q9Y2W2 641 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 TRAF6Q9Y4K3 522 aa12.72□□□□□ -0.37
SMARCE1-205ENST00000431889 CUBNO60494 3623 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 CLOCKO15516 846 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 TRIM13O60858 407 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 LINGO3P0C6S8 592 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 CREB1P16220 341 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 RAC1P63000 192 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 SPDYE7PQ495Y7 208 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 HMGN2P46Q86SG4 172 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 TMCO5AQ8N6Q1 288 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 FBXO27Q8NI29 283 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 AKAP1Q92667 903 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 ZBTB8AQ96BR9 441 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 KLHL15Q96M94 604 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 BTBD2Q9BX70 525 aa12.71□□□□□ -0.37
SMARCE1-205ENST00000431889 ANK3Q12955 4377 aaKnown RBP12.71□□□□□ -0.38
SMARCE1-205ENST00000431889 A0A087WZY1 265 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 A0A1W2PNR3 127 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 SCAMP2O15127 329 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 ADAMDEC1O15204 470 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 CYP7B1O75881 506 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 CHEK2O96017 543 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 PTNP21246 168 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 ME2P23368 584 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 EDNRAP25101 427 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 SOAT1P35610 550 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 ZNF239Q16600 458 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 TMEM176BQ3YBM2 270 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 BEX5Q5H9J7 111 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 LRRC75A-AS1Q8N1F1 130 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 OR6Y1Q8NGX8 325 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 PIP5K1AQ99755 562 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 ACSS1Q9NUB1 689 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 NTMQ9P121 344 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 ZDHHC2Q9UIJ5 367 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
SMARCE1-205ENST00000431889 CENPVL1A0A0U1RR11 272 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 H3BQF6 201 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 CFLARO15519 480 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 NEFHP12036 1026 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 ENPP1P22413 925 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 HPCAL1P37235 193 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 CCT3P49368 545 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 CCR4P51679 360 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 CAPRIN1Q14444 709 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 FGFBP1Q14512 234 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 DCST2Q5T1A1 773 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 IL23RQ5VWK5 629 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 C20orf204Q6ZNR8 217 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 TDRPQ86YL5 185 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 APOPT1Q96IL0 206 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 MDFIQ99750 246 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 IQCGQ9H095 443 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 QRSL1Q9H0R6 528 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 STOML1Q9UBI4 398 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 TTC36A6NLP5 189 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 ZNF195O14628 629 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 TBX19O60806 448 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 ADAP00813 363 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 TUBBP07437 444 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 ATP6V1C1P21283 382 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 CDKN1AP38936 164 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 SERPINB4P48594 390 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
SMARCE1-205ENST00000431889 EXOSC6Q5RKV6 272 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms